Analysis of interatomic Contacts of Structural Units in PDB entry:
6GXZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6GXZ entry

There are 4 chains in PDB entry 6GXZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 283GLY 441
C
 ILE 283LEU 443
D
 SER 203SER 290
E
 SER 203SER 290
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 6GXZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
284 295Right-handed alpha
Helix 2
AA2
A
297 311Right-handed alpha
Helix 3
AA3
A
316 329Right-handed alpha
Helix 4
AA4
A
331 346Right-handed alpha
Helix 5
AA5
A
349 363Right-handed alpha
Helix 6
AA6
A
365 380Right-handed alpha
Helix 7
AA7
A
383 400Right-handed alpha
Helix 8
AA8
A
402 408Right-handed alpha
Helix 9
AA9
C
284 295Right-handed alpha
Helix 10
AB1
C
297 312Right-handed alpha
Helix 11
AB2
C
316 329Right-handed alpha
Helix 12
AB3
C
331 346Right-handed alpha
Helix 13
AB4
C
349 363Right-handed alpha
Helix 14
AB5
C
365 380Right-handed alpha
Helix 15
AB6
C
383 400Right-handed alpha
Helix 16
AB7
C
402 408Right-handed alpha
Helix 17
AB8
C
411 415Right-handed 310
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There are 4 sheets in PDB entry 6GXZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
433 435first strand
Strand 2
E
237 239anti-parallel
Strand 3
E
243 246anti-parallel
Strand 4
E
255 258anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
437 440first strand
Strand 2
E
269 273parallel
Strand 3
E
278 284anti-parallel
Strand 4
E
219 225anti-parallel
Strand 5
E
209 216anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
433 435first strand
Strand 2
D
237 239anti-parallel
Strand 3
D
243 246anti-parallel
Strand 4
D
255 258anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
437 440first strand
Strand 2
D
269 273parallel
Strand 3
D
278 284anti-parallel
Strand 4
D
219 225anti-parallel
Strand 5
D
209 216anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il