Analysis of interatomic Contacts of Structural Units in PDB entry:
6GY3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6GY3 entry

There are 4 chains in PDB entry 6GY3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 19ASP 220
B
 ASN 19ASP 220
C
 G 1 C 18
D
 G 1 C 18
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 6GY3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
19 36Right-handed alpha
Helix 2
AA2
A
41 50Right-handed alpha
Helix 3
AA3
A
52 54Right-handed 310
Helix 4
AA4
A
55 60Right-handed alpha
Helix 5
AA5
A
62 88Right-handed alpha
Helix 6
AA6
A
91 108Right-handed alpha
Helix 7
AA7
A
113 118Right-handed 310
Helix 8
AA8
A
120 125Right-handed 310
Helix 9
AA9
A
128 151Right-handed alpha
Helix 10
AB1
A
153 156Right-handed 310
Helix 11
AB2
A
157 165Right-handed alpha
Helix 12
AB3
A
166 169Right-handed 310
Helix 13
AB4
A
186 200Right-handed alpha
Helix 14
AB5
A
207 219Right-handed alpha
Helix 15
AB6
B
20 36Right-handed alpha
Helix 16
AB7
B
41 50Right-handed alpha
Helix 17
AB8
B
52 54Right-handed 310
Helix 18
AB9
B
55 60Right-handed alpha
Helix 19
AC1
B
62 88Right-handed alpha
Helix 20
AC2
B
91 108Right-handed alpha
Helix 21
AC3
B
113 118Right-handed 310
Helix 22
AC4
B
120 125Right-handed 310
Helix 23
AC5
B
128 151Right-handed alpha
Helix 24
AC6
B
153 156Right-handed 310
Helix 25
AC7
B
157 165Right-handed alpha
Helix 26
AC8
B
166 169Right-handed 310
Helix 27
AC9
B
186 200Right-handed alpha
Helix 28
AD1
B
207 219Right-handed alpha
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There are no sheets in PDB entry 6GY3
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il