Analysis of interatomic Contacts of Structural Units in PDB entry:
6GYB

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6GYB entry

There are 42 chains in PDB entry 6GYB (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
a	CYS 22	PRO 132
b	GLN 27	LYS 255
c	PRO 150	LYS 389
d	CYS 22	PRO 132
e	GLN 27	LYS 255
f	PRO 150	LYS 389
g	CYS 22	PRO 132
h	GLN 27	LYS 255
i	PRO 150	LYS 389
j	CYS 22	PRO 132
k	GLN 27	LYS 255
l	PRO 150	LYS 389
m	CYS 22	PRO 132
n	GLN 27	LYS 255
o	PRO 150	LYS 389
p	CYS 22	PRO 132
q	GLN 27	LYS 255
r	PRO 150	LYS 389
s	CYS 22	PRO 132
t	GLN 27	LYS 255
u	PRO 150	LYS 389
A	CYS 22	PRO 132
B	GLN 27	LYS 255
C	PRO 150	LYS 389
D	CYS 22	PRO 132
E	GLN 27	LYS 255
F	PRO 150	LYS 389
G	CYS 22	PRO 132
H	GLN 27	LYS 255
I	PRO 150	LYS 389
J	CYS 22	PRO 132
K	GLN 27	LYS 255
L	PRO 150	LYS 389
M	CYS 22	PRO 132
N	GLN 27	LYS 255
O	PRO 150	LYS 389
P	CYS 22	PRO 132
Q	GLN 27	LYS 255
R	PRO 150	LYS 389
S	CYS 22	PRO 132
T	GLN 27	LYS 255
U	PRO 150	LYS 389

There are126 helices in PDB entry 6GYB. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	a	63	74	Right-handed alpha
Helix 2	AA2	a	90	94	Right-handed 310
Helix 3	AA3	a	100	112	Right-handed alpha
Helix 4	AA4	b	67	69	Right-handed 310
Helix 5	AA5	b	116	123	Right-handed alpha
Helix 6	AA6	b	135	140	Right-handed alpha
Helix 7	AA7	c	152	160	Right-handed alpha
Helix 8	AA8	c	295	319	Right-handed alpha
Helix 9	AA9	c	342	359	Right-handed alpha
Helix 10	AB1	d	63	74	Right-handed alpha
Helix 11	AB2	d	90	94	Right-handed 310
Helix 12	AB3	d	100	112	Right-handed alpha
Helix 13	AB4	e	67	69	Right-handed 310
Helix 14	AB5	e	116	123	Right-handed alpha
Helix 15	AB6	e	135	140	Right-handed alpha
Helix 16	AB7	f	152	160	Right-handed alpha
Helix 17	AB8	f	295	319	Right-handed alpha
Helix 18	AB9	f	342	359	Right-handed alpha
Helix 19	AC1	g	63	74	Right-handed alpha
Helix 20	AC2	g	90	94	Right-handed 310
Helix 21	AC3	g	100	112	Right-handed alpha
Helix 22	AC4	h	67	69	Right-handed 310
Helix 23	AC5	h	116	123	Right-handed alpha
Helix 24	AC6	h	135	140	Right-handed alpha
Helix 25	AC7	i	152	160	Right-handed alpha
Helix 26	AC8	i	295	319	Right-handed alpha
Helix 27	AC9	i	342	359	Right-handed alpha
Helix 28	AD1	j	63	74	Right-handed alpha
Helix 29	AD2	j	90	94	Right-handed 310
Helix 30	AD3	j	100	112	Right-handed alpha
Helix 31	AD4	k	67	69	Right-handed 310
Helix 32	AD5	k	116	123	Right-handed alpha
Helix 33	AD6	k	135	140	Right-handed alpha
Helix 34	AD7	l	152	160	Right-handed alpha
Helix 35	AD8	l	295	319	Right-handed alpha
Helix 36	AD9	l	342	359	Right-handed alpha
Helix 37	AE1	m	63	74	Right-handed alpha
Helix 38	AE2	m	90	94	Right-handed 310
Helix 39	AE3	m	100	112	Right-handed alpha
Helix 40	AE4	n	67	69	Right-handed 310
Helix 41	AE5	n	116	123	Right-handed alpha
Helix 42	AE6	n	135	140	Right-handed alpha
Helix 43	AE7	o	152	160	Right-handed alpha
Helix 44	AE8	o	295	319	Right-handed alpha
Helix 45	AE9	o	342	359	Right-handed alpha
Helix 46	AF1	p	63	74	Right-handed alpha
Helix 47	AF2	p	90	94	Right-handed 310
Helix 48	AF3	p	100	112	Right-handed alpha
Helix 49	AF4	q	67	69	Right-handed 310
Helix 50	AF5	q	116	123	Right-handed alpha
Helix 51	AF6	q	135	140	Right-handed alpha
Helix 52	AF7	r	152	160	Right-handed alpha
Helix 53	AF8	r	295	319	Right-handed alpha
Helix 54	AF9	r	342	359	Right-handed alpha
Helix 55	AG1	s	63	74	Right-handed alpha
Helix 56	AG2	s	90	94	Right-handed 310
Helix 57	AG3	s	100	112	Right-handed alpha
Helix 58	AG4	t	67	69	Right-handed 310
Helix 59	AG5	t	116	123	Right-handed alpha
Helix 60	AG6	t	135	140	Right-handed alpha
Helix 61	AG7	u	152	160	Right-handed alpha
Helix 62	AG8	u	295	319	Right-handed alpha
Helix 63	AG9	u	342	359	Right-handed alpha
Helix 64	AH1	A	63	74	Right-handed alpha
Helix 65	AH2	A	90	94	Right-handed 310
Helix 66	AH3	A	100	112	Right-handed alpha
Helix 67	AH4	B	67	69	Right-handed 310
Helix 68	AH5	B	116	123	Right-handed alpha
Helix 69	AH6	B	135	140	Right-handed alpha
Helix 70	AH7	C	152	160	Right-handed alpha
Helix 71	AH8	C	295	319	Right-handed alpha
Helix 72	AH9	C	342	359	Right-handed alpha
Helix 73	AI1	D	63	74	Right-handed alpha
Helix 74	AI2	D	90	94	Right-handed 310
Helix 75	AI3	D	100	112	Right-handed alpha
Helix 76	AI4	E	67	69	Right-handed 310
Helix 77	AI5	E	116	123	Right-handed alpha
Helix 78	AI6	E	135	140	Right-handed alpha
Helix 79	AI7	F	152	160	Right-handed alpha
Helix 80	AI8	F	295	319	Right-handed alpha
Helix 81	AI9	F	342	359	Right-handed alpha
Helix 82	AJ1	G	63	74	Right-handed alpha
Helix 83	AJ2	G	90	94	Right-handed 310
Helix 84	AJ3	G	100	112	Right-handed alpha
Helix 85	AJ4	H	67	69	Right-handed 310
Helix 86	AJ5	H	116	123	Right-handed alpha
Helix 87	AJ6	H	135	140	Right-handed alpha
Helix 88	AJ7	I	152	160	Right-handed alpha
Helix 89	AJ8	I	295	319	Right-handed alpha
Helix 90	AJ9	I	342	359	Right-handed alpha
Helix 91	AK1	J	63	74	Right-handed alpha
Helix 92	AK2	J	90	94	Right-handed 310
Helix 93	AK3	J	100	112	Right-handed alpha
Helix 94	AK4	K	67	69	Right-handed 310
Helix 95	AK5	K	116	123	Right-handed alpha
Helix 96	AK6	K	135	140	Right-handed alpha
Helix 97	AK7	L	152	160	Right-handed alpha
Helix 98	AK8	L	295	319	Right-handed alpha
Helix 99	AK9	L	342	359	Right-handed alpha
Helix 100	AL1	M	63	74	Right-handed alpha
Helix 101	AL2	M	90	94	Right-handed 310
Helix 102	AL3	M	100	112	Right-handed alpha
Helix 103	AL4	N	67	69	Right-handed 310
Helix 104	AL5	N	116	123	Right-handed alpha
Helix 105	AL6	N	135	140	Right-handed alpha
Helix 106	AL7	O	152	160	Right-handed alpha
Helix 107	AL8	O	295	319	Right-handed alpha
Helix 108	AL9	O	342	359	Right-handed alpha
Helix 109	AM1	P	63	74	Right-handed alpha
Helix 110	AM2	P	90	94	Right-handed 310
Helix 111	AM3	P	100	112	Right-handed alpha
Helix 112	AM4	Q	67	69	Right-handed 310
Helix 113	AM5	Q	116	123	Right-handed alpha
Helix 114	AM6	Q	135	140	Right-handed alpha
Helix 115	AM7	R	152	160	Right-handed alpha
Helix 116	AM8	R	295	319	Right-handed alpha
Helix 117	AM9	R	342	359	Right-handed alpha
Helix 118	AN1	S	63	74	Right-handed alpha
Helix 119	AN2	S	90	94	Right-handed 310
Helix 120	AN3	S	100	112	Right-handed alpha
Helix 121	AN4	T	67	69	Right-handed 310
Helix 122	AN5	T	116	123	Right-handed alpha
Helix 123	AN6	T	135	140	Right-handed alpha
Helix 124	AN7	U	152	160	Right-handed alpha
Helix 125	AN8	U	295	319	Right-handed alpha
Helix 126	AN9	U	342	359	Right-handed alpha

Analysis of interatomic Contacts of Structural Units in PDB entry: 6GYB

Analysis of interatomic Contacts of Structural Units in PDB entry:
6GYB