Analysis of interatomic Contacts of Structural Units in PDB entry:
6GZY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6GZY entry

There are 2 chains in PDB entry 6GZY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 858LYS 1072
B
 GLY 859LYS 1072
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 6GZY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
859 867Right-handed alpha
Helix 2
AA2
A
930 935Right-handed alpha
Helix 3
AA3
A
938 949Right-handed alpha
Helix 4
AA4
A
998 1013Right-handed alpha
Helix 5
AA5
A
1016 1021Right-handed 310
Helix 6
AA6
A
1022 1035Right-handed alpha
Helix 7
AA7
A
1045 1061Right-handed alpha
Helix 8
AA8
B
860 866Right-handed alpha
Helix 9
AA9
B
930 935Right-handed alpha
Helix 10
AB1
B
938 949Right-handed alpha
Helix 11
AB2
B
998 1013Right-handed alpha
Helix 12
AB3
B
1016 1021Right-handed 310
Helix 13
AB4
B
1022 1035Right-handed alpha
Helix 14
AB5
B
1047 1061Right-handed alpha
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There are 7 sheets in PDB entry 6GZY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
869 870first strand
Strand 2
A
877 878anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
887 889first strand
Strand 2
A
896 898anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
972 973first strand
Strand 2
A
984 985anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
868 870first strand
Strand 2
B
877 879anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
887 889first strand
Strand 2
B
896 898anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
905 906first strand
Strand 2
B
923 924anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
972 973first strand
Strand 2
B
984 985anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il