Analysis of interatomic Contacts of Structural Units in PDB entry:
6H0D


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6H0D entry

There is 1 chain in PDB entry 6H0D (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 26GLU 428
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 6H0D. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
53 57Right-handed 310
Helix 2
AA2
A
84 96Right-handed alpha
Helix 3
AA3
A
97 101Right-handed 310
Helix 4
AA4
A
110 124Right-handed alpha
Helix 5
AA5
A
132 143Right-handed alpha
Helix 6
AA6
A
213 228Right-handed alpha
Helix 7
AA7
A
231 243Right-handed alpha
Helix 8
AA8
A
261 278Right-handed alpha
Helix 9
AA9
A
292 308Right-handed alpha
Helix 10
AB1
A
321 332Right-handed alpha
Helix 11
AB2
A
347 361Right-handed alpha
Helix 12
AB3
A
377 390Right-handed alpha
Helix 13
AB4
A
406 427Right-handed alpha
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There are 4 sheets in PDB entry 6H0D. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
29 36first strand
Strand 2
A
39 46anti-parallel
Strand 3
A
62 70anti-parallel
Strand 4
A
74 77anti-parallel
Strand 5
A
103 105parallel
Strand 6
A
128 131parallel
Strand 7
A
152 154parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
160 162first strand
Strand 2
A
168 173anti-parallel
Strand 3
A
183 187anti-parallel
Strand 4
A
192 196anti-parallel
Strand 5
A
249 252parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
311 316first strand
Strand 2
A
282 287parallel
Strand 3
A
334 338parallel
Strand 4
A
366 373parallel
Strand 5
A
393 394parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
311 316first strand
Strand 2
A
282 287parallel
Strand 3
A
334 338parallel
Strand 4
A
366 373parallel
Strand 5
A
399 402parallel
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