Analysis of interatomic Contacts of Structural Units in PDB entry:
6H0P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6H0P entry

There are 2 chains in PDB entry 6H0P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 8ALA 382
B
 VAL 8ALA 382
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 6H0P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
27 41Right-handed alpha
Helix 2
AA2
A
52 59Right-handed 310
Helix 3
AA3
A
81 90Right-handed alpha
Helix 4
AA4
A
101 105Right-handed 310
Helix 5
AA5
A
108 117Right-handed alpha
Helix 6
AA6
A
120 130Right-handed alpha
Helix 7
AA7
A
139 143Right-handed 310
Helix 8
AA8
A
146 151Right-handed 310
Helix 9
AA9
A
155 164Right-handed 310
Helix 10
AB1
A
182 203Right-handed alpha
Helix 11
AB2
A
236 246Right-handed alpha
Helix 12
AB3
A
255 257Right-handed 310
Helix 13
AB4
A
265 278Right-handed alpha
Helix 14
AB5
A
278 283Right-handed alpha
Helix 15
AB6
A
298 314Right-handed alpha
Helix 16
AB7
A
326 332Right-handed alpha
Helix 17
AB8
A
345 353Right-handed alpha
Helix 18
AB9
A
359 381Right-handed alpha
Helix 19
AC1
B
27 41Right-handed alpha
Helix 20
AC2
B
52 56Right-handed 310
Helix 21
AC3
B
82 90Right-handed alpha
Helix 22
AC4
B
101 105Right-handed 310
Helix 23
AC5
B
108 117Right-handed alpha
Helix 24
AC6
B
120 130Right-handed alpha
Helix 25
AC7
B
139 144Right-handed 310
Helix 26
AC8
B
146 151Right-handed 310
Helix 27
AC9
B
155 164Right-handed 310
Helix 28
AD1
B
182 203Right-handed alpha
Helix 29
AD2
B
235 246Right-handed alpha
Helix 30
AD3
B
255 257Right-handed 310
Helix 31
AD4
B
265 277Right-handed alpha
Helix 32
AD5
B
278 283Right-handed alpha
Helix 33
AD6
B
298 314Right-handed alpha
Helix 34
AD7
B
326 332Right-handed alpha
Helix 35
AD8
B
345 353Right-handed alpha
Helix 36
AD9
B
359 381Right-handed alpha
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There are 9 sheets in PDB entry 6H0P. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 74first strand
Strand 2
A
44 49parallel
Strand 3
A
19 23parallel
Strand 4
A
92 95parallel
Strand 5
A
133 137parallel
Strand 6
A
207 212parallel
Strand 7
A
286 289parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
173 175first strand
Strand 2
B
173 175anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
215 216first strand
Strand 2
A
263 264parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
250 253first strand
Strand 2
A
322 325parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
259 261first strand
Strand 2
A
295 297anti-parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
70 74first strand
Strand 2
B
44 49parallel
Strand 3
B
19 23parallel
Strand 4
B
92 95parallel
Strand 5
B
133 137parallel
Strand 6
B
207 212parallel
Strand 7
B
286 289parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
215 216first strand
Strand 2
B
263 264parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
250 253first strand
Strand 2
B
322 325parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
259 261first strand
Strand 2
B
295 297anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il