Analysis of interatomic Contacts of Structural Units in PDB entry:
6H0T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6H0T entry

There is 1 chain in PDB entry 6H0T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 1THR 533
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 6H0T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
127 135Right-handed alpha
Helix 2
AA2
A
146 151Right-handed alpha
Helix 3
AA3
A
161 178Right-handed alpha
Helix 4
AA4
A
179 181Right-handed 310
Helix 5
AA5
A
194 206Right-handed alpha
Helix 6
AA6
A
207 210Right-handed 310
Helix 7
AA7
A
232 245Right-handed alpha
Helix 8
AA8
A
250 260Right-handed alpha
Helix 9
AA9
A
262 269Right-handed alpha
Helix 10
AB1
A
280 285Right-handed 310
Helix 11
AB2
A
299 308Right-handed 310
Helix 12
AB3
A
321 329Right-handed alpha
Helix 13
AB4
A
330 334Right-handed 310
Helix 14
AB5
A
340 352Right-handed alpha
Helix 15
AB6
A
355 368Right-handed alpha
Helix 16
AB7
A
369 372Right-handed 310
Helix 17
AB8
A
376 393Right-handed alpha
Helix 18
AB9
A
393 408Right-handed alpha
Helix 19
AC1
A
437 443Right-handed alpha
Helix 20
AC2
A
444 449Right-handed alpha
Helix 21
AC3
A
450 453Right-handed 310
Helix 22
AC4
A
454 475Right-handed alpha
Helix 23
AC5
A
506 508Right-handed 310
Helix 24
AC6
A
515 524Right-handed alpha
Helix 25
AC7
A
524 529Right-handed alpha
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There are 3 sheets in PDB entry 6H0T. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 8first strand
Strand 2
A
11 14anti-parallel
Strand 3
A
54 56parallel
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There are 11 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 19first strand
Strand 2
A
26 34anti-parallel
Strand 3
A
82 89anti-parallel
Strand 4
A
137 141anti-parallel
Strand 5
A
98 104parallel
Strand 6
A
183 193parallel
Strand 7
A
215 219parallel
Strand 8
A
311 317parallel
Strand 9
A
413 418parallel
Strand 10
A
497 501parallel
Strand 11
A
510 512anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
66 67first strand
Strand 2
A
74 75anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il