Analysis of interatomic Contacts of Structural Units in PDB entry:
6H16


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6H16 entry

There are 2 chains in PDB entry 6H16 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 630ALA 1247
B
 GLU 2SER 120
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 6H16. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
883 887Right-handed 310
Helix 2
AA2
A
891 897Right-handed alpha
Helix 3
AA3
A
898 900Right-handed 310
Helix 4
AA4
A
1198 1203Right-handed alpha
Helix 5
AA5
A
1209 1214Right-handed 310
Helix 6
AA6
B
88 92Right-handed 310
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There are 19 sheets in PDB entry 6H16. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
641 646first strand
Strand 2
A
633 638anti-parallel
Strand 3
A
876 882anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
664 670first strand
Strand 2
A
675 680anti-parallel
Strand 3
A
685 690anti-parallel
Strand 4
A
697 700anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
709 713first strand
Strand 2
A
718 723anti-parallel
Strand 3
A
728 733anti-parallel
Strand 4
A
740 743anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
750 756first strand
Strand 2
A
761 766anti-parallel
Strand 3
A
772 777anti-parallel
Strand 4
A
784 787anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
793 799first strand
Strand 2
A
804 809anti-parallel
Strand 3
A
814 819anti-parallel
Strand 4
A
826 829anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
835 841first strand
Strand 2
A
844 849anti-parallel
Strand 3
A
854 859anti-parallel
Strand 4
A
867 870anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
903 907first strand
Strand 2
A
911 915anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
921 922first strand
Strand 2
A
929 930anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
957 958first strand
Strand 2
A
944 947anti-parallel
Strand 3
A
935 940anti-parallel
Strand 4
A
1188 1194anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
967 973first strand
Strand 2
A
978 983anti-parallel
Strand 3
A
988 992anti-parallel
Strand 4
A
1000 1003anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1016 1022first strand
Strand 2
A
1027 1032anti-parallel
Strand 3
A
1037 1042anti-parallel
Strand 4
A
1047 1052anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1059 1065first strand
Strand 2
A
1070 1077anti-parallel
Strand 3
A
1080 1087anti-parallel
Strand 4
A
1094 1097anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1107 1110first strand
Strand 2
A
1115 1120anti-parallel
Strand 3
A
1125 1130anti-parallel
Strand 4
A
1137 1138anti-parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1147 1152first strand
Strand 2
A
1156 1161anti-parallel
Strand 3
A
1166 1171anti-parallel
Strand 4
A
1179 1183anti-parallel
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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1217 1220first strand
Strand 2
A
1226 1229anti-parallel
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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1235 1236first strand
Strand 2
A
1243 1244anti-parallel
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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3 8first strand
Strand 2
B
18 27anti-parallel
Strand 3
B
79 85anti-parallel
Strand 4
B
70 73anti-parallel
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There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
12 14first strand
Strand 2
B
114 119parallel
Strand 3
B
93 101anti-parallel
Strand 4
B
32 40anti-parallel
Strand 5
B
46 53anti-parallel
Strand 6
B
59 61anti-parallel
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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
12 14first strand
Strand 2
B
114 119parallel
Strand 3
B
93 101anti-parallel
Strand 4
B
108 110anti-parallel
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