Analysis of interatomic Contacts of Structural Units in PDB entry:
6H2L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6H2L entry

There are 2 chains in PDB entry 6H2L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 21SER 216
B
 GLY 21HIS 224
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 6H2L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
35 37Right-handed 310
Helix 2
AA2
A
141 146Right-handed 310
Helix 3
AA3
A
193 198Right-handed alpha
Helix 4
AA4
B
35 37Right-handed 310
Helix 5
AA5
B
141 146Right-handed 310
Helix 6
AA6
B
193 198Right-handed alpha
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There are 8 sheets in PDB entry 6H2L. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 33first strand
Strand 2
A
202 208parallel
Strand 3
A
182 191anti-parallel
Strand 4
A
75 81anti-parallel
Strand 5
A
137 140anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
40 41first strand
Strand 2
A
210 215parallel
Strand 3
A
175 179anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 56first strand
Strand 2
A
157 168anti-parallel
Strand 3
A
114 122anti-parallel
Strand 4
A
102 108anti-parallel
Strand 5
A
85 91anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 67first strand
Strand 2
A
157 168anti-parallel
Strand 3
A
114 122anti-parallel
Strand 4
A
130 131anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
30 33first strand
Strand 2
B
202 208parallel
Strand 3
B
182 191anti-parallel
Strand 4
B
75 81anti-parallel
Strand 5
B
137 140anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
40 42first strand
Strand 2
B
210 216parallel
Strand 3
B
175 179anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
52 56first strand
Strand 2
B
157 168anti-parallel
Strand 3
B
114 122anti-parallel
Strand 4
B
102 108anti-parallel
Strand 5
B
85 91anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
60 67first strand
Strand 2
B
157 168anti-parallel
Strand 3
B
114 122anti-parallel
Strand 4
B
130 131anti-parallel
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