Analysis of interatomic Contacts of Structural Units in PDB entry:
6H2R


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6H2R entry

There are 4 chains in PDB entry 6H2R (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 2GLU 294
B
 PRO 2LYS 293
C
 PRO 2GLU 294
D
 PRO 2GLU 294
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 56 helices in PDB entry 6H2R. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
19 33Right-handed alpha
Helix 2
AA2
A
46 50Right-handed 310
Helix 3
AA3
A
51 64Right-handed alpha
Helix 4
AA4
A
77 88Right-handed alpha
Helix 5
AA5
A
89 91Right-handed 310
Helix 6
AA6
A
108 123Right-handed alpha
Helix 7
AA7
A
132 137Right-handed alpha
Helix 8
AA8
A
141 149Right-handed alpha
Helix 9
AA9
A
160 171Right-handed alpha
Helix 10
AB1
A
203 216Right-handed alpha
Helix 11
AB2
A
218 238Right-handed alpha
Helix 12
AB3
A
240 254Right-handed alpha
Helix 13
AB4
A
268 289Right-handed alpha
Helix 14
AB5
B
19 33Right-handed alpha
Helix 15
AB6
B
46 50Right-handed 310
Helix 16
AB7
B
51 64Right-handed alpha
Helix 17
AB8
B
77 88Right-handed alpha
Helix 18
AB9
B
89 91Right-handed 310
Helix 19
AC1
B
108 123Right-handed alpha
Helix 20
AC2
B
132 137Right-handed alpha
Helix 21
AC3
B
141 149Right-handed alpha
Helix 22
AC4
B
160 171Right-handed alpha
Helix 23
AC5
B
182 187Right-handed alpha
Helix 24
AC6
B
198 202Right-handed 310
Helix 25
AC7
B
203 216Right-handed alpha
Helix 26
AC8
B
218 237Right-handed alpha
Helix 27
AC9
B
240 254Right-handed alpha
Helix 28
AD1
B
268 289Right-handed alpha
Helix 29
AD2
C
19 33Right-handed alpha
Helix 30
AD3
C
46 50Right-handed 310
Helix 31
AD4
C
51 64Right-handed alpha
Helix 32
AD5
C
77 88Right-handed alpha
Helix 33
AD6
C
89 91Right-handed 310
Helix 34
AD7
C
108 123Right-handed alpha
Helix 35
AD8
C
132 137Right-handed alpha
Helix 36
AD9
C
141 149Right-handed alpha
Helix 37
AE1
C
160 171Right-handed alpha
Helix 38
AE2
C
182 187Right-handed alpha
Helix 39
AE3
C
203 216Right-handed alpha
Helix 40
AE4
C
218 237Right-handed alpha
Helix 41
AE5
C
240 254Right-handed alpha
Helix 42
AE6
C
268 289Right-handed alpha
Helix 43
AE7
D
19 33Right-handed alpha
Helix 44
AE8
D
46 50Right-handed 310
Helix 45
AE9
D
51 64Right-handed alpha
Helix 46
AF1
D
77 88Right-handed alpha
Helix 47
AF2
D
89 91Right-handed 310
Helix 48
AF3
D
108 123Right-handed alpha
Helix 49
AF4
D
132 137Right-handed alpha
Helix 50
AF5
D
141 149Right-handed alpha
Helix 51
AF6
D
160 171Right-handed alpha
Helix 52
AF7
D
182 187Right-handed alpha
Helix 53
AF8
D
203 216Right-handed alpha
Helix 54
AF9
D
218 238Right-handed alpha
Helix 55
AG1
D
240 254Right-handed alpha
Helix 56
AG2
D
268 289Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 6H2R. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 7first strand
Strand 2
A
37 40parallel
Strand 3
A
69 72parallel
Strand 4
A
95 99parallel
Strand 5
A
127 131parallel
Strand 6
A
151 156parallel
Strand 7
A
175 178parallel
Strand 8
A
194 196parallel
Strand 9
A
3 7parallel
Back to list of sheets
Back to top of page

There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3 7first strand
Strand 2
B
37 40parallel
Strand 3
B
69 72parallel
Strand 4
B
95 99parallel
Strand 5
B
127 131parallel
Strand 6
B
153 156parallel
Strand 7
B
175 178parallel
Strand 8
B
194 196parallel
Strand 9
B
3 7parallel
Back to list of sheets
Back to top of page

There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
3 7first strand
Strand 2
C
37 40parallel
Strand 3
C
69 72parallel
Strand 4
C
95 99parallel
Strand 5
C
127 131parallel
Strand 6
C
153 156parallel
Strand 7
C
175 178parallel
Strand 8
C
194 196parallel
Strand 9
C
3 7parallel
Back to list of sheets
Back to top of page

There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
3 7first strand
Strand 2
D
37 40parallel
Strand 3
D
69 72parallel
Strand 4
D
95 99parallel
Strand 5
D
127 131parallel
Strand 6
D
153 156parallel
Strand 7
D
175 178parallel
Strand 8
D
194 196parallel
Strand 9
D
3 7parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il