Analysis of interatomic Contacts of Structural Units in PDB entry:
6H2T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6H2T entry

There is 1 chain in PDB entry 6H2T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 41ASP 328
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 6H2T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
77 85Right-handed alpha
Helix 2
AA2
A
85 92Right-handed alpha
Helix 3
AA3
A
117 132Right-handed alpha
Helix 4
AA4
A
143 145Right-handed 310
Helix 5
AA5
A
146 153Right-handed alpha
Helix 6
AA6
A
166 171Right-handed alpha
Helix 7
AA7
A
196 201Right-handed 310
Helix 8
AA8
A
211 218Right-handed alpha
Helix 9
AA9
A
231 241Right-handed alpha
Helix 10
AB1
A
251 261Right-handed alpha
Helix 11
AB2
A
284 301Right-handed alpha
Helix 12
AB3
A
302 312Right-handed alpha
Helix 13
AB4
A
313 316Right-handed 310
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There are 5 sheets in PDB entry 6H2T. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 50first strand
Strand 2
A
225 229anti-parallel
Strand 3
A
204 208parallel
Strand 4
A
246 250parallel
Strand 5
A
180 189anti-parallel
Strand 6
A
264 267anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 50first strand
Strand 2
A
225 229anti-parallel
Strand 3
A
204 208parallel
Strand 4
A
246 250parallel
Strand 5
A
180 189anti-parallel
Strand 6
A
273 276anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 71first strand
Strand 2
A
325 326parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
137 141first strand
Strand 2
A
94 98parallel
Strand 3
A
158 159parallel
Strand 4
A
279 281anti-parallel
Strand 5
A
173 175anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
101 102first strand
Strand 2
A
106 108anti-parallel
Strand 3
A
115 116anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il