Analysis of interatomic Contacts of Structural Units in PDB entry:
6H30

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6H30 entry

There are 2 chains in PDB entry 6H30 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 28	ASP 483
B	THR 28	GLU 481

There are 38 helices in PDB entry 6H30. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	52	66	Right-handed alpha
Helix 2	AA2	A	75	85	Right-handed alpha
Helix 3	AA3	A	100	103	Right-handed 310
Helix 4	AA4	A	128	133	Right-handed 310
Helix 5	AA5	A	143	152	Right-handed alpha
Helix 6	AA6	A	152	157	Right-handed alpha
Helix 7	AA7	A	165	175	Right-handed alpha
Helix 8	AA8	A	185	195	Right-handed alpha
Helix 9	AA9	A	220	238	Right-handed alpha
Helix 10	AB1	A	238	247	Right-handed alpha
Helix 11	AB2	A	284	298	Right-handed alpha
Helix 12	AB3	A	307	317	Right-handed alpha
Helix 13	AB4	A	332	335	Right-handed 310
Helix 14	AB5	A	361	366	Right-handed 310
Helix 15	AB6	A	376	390	Right-handed alpha
Helix 16	AB7	A	398	408	Right-handed alpha
Helix 17	AB8	A	418	427	Right-handed alpha
Helix 18	AB9	A	452	470	Right-handed alpha
Helix 19	AC1	A	470	481	Right-handed alpha
Helix 20	AC2	B	52	66	Right-handed alpha
Helix 21	AC3	B	75	85	Right-handed alpha
Helix 22	AC4	B	98	103	Right-handed alpha
Helix 23	AC5	B	128	133	Right-handed 310
Helix 24	AC6	B	143	152	Right-handed alpha
Helix 25	AC7	B	152	157	Right-handed alpha
Helix 26	AC8	B	165	175	Right-handed alpha
Helix 27	AC9	B	185	195	Right-handed alpha
Helix 28	AD1	B	220	238	Right-handed alpha
Helix 29	AD2	B	238	247	Right-handed alpha
Helix 30	AD3	B	284	298	Right-handed alpha
Helix 31	AD4	B	307	317	Right-handed alpha
Helix 32	AD5	B	330	335	Right-handed alpha
Helix 33	AD6	B	361	366	Right-handed 310
Helix 34	AD7	B	376	390	Right-handed alpha
Helix 35	AD8	B	398	408	Right-handed alpha
Helix 36	AD9	B	418	427	Right-handed alpha
Helix 37	AE1	B	453	469	Right-handed alpha
Helix 38	AE2	B	470	481	Right-handed alpha

There are 15 sheets in PDB entry 6H30. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	68	72	first strand
Strand 2	A	29	33	parallel
Strand 3	A	90	96	parallel
Strand 4	A	211	216	anti-parallel
Strand 5	A	105	107	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	43	44	first strand
Strand 2	A	50	51	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	159	163	first strand
Strand 2	A	136	140	parallel
Strand 3	A	180	184	parallel
Strand 4	A	115	119	anti-parallel
Strand 5	A	205	206	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	301	305	first strand
Strand 2	A	262	266	parallel
Strand 3	A	322	323	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	275	276	first strand
Strand 2	A	282	283	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	337	339	first strand
Strand 2	A	446	448	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	392	396	first strand
Strand 2	A	369	373	parallel
Strand 3	A	413	417	parallel
Strand 4	A	344	353	anti-parallel
Strand 5	A	431	432	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	392	396	first strand
Strand 2	A	369	373	parallel
Strand 3	A	413	417	parallel
Strand 4	A	344	353	anti-parallel
Strand 5	A	438	443	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	68	72	first strand
Strand 2	B	29	33	parallel
Strand 3	B	90	96	parallel
Strand 4	B	211	216	anti-parallel
Strand 5	B	105	107	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	43	44	first strand
Strand 2	B	50	51	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	159	163	first strand
Strand 2	B	136	140	parallel
Strand 3	B	180	184	parallel
Strand 4	B	115	119	anti-parallel
Strand 5	B	205	206	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	301	302	first strand
Strand 2	B	262	265	parallel
Strand 3	B	322	323	parallel
Strand 4	B	446	448	anti-parallel
Strand 5	B	337	339	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	275	276	first strand
Strand 2	B	282	283	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	392	396	first strand
Strand 2	B	369	373	parallel
Strand 3	B	413	417	parallel
Strand 4	B	344	353	anti-parallel
Strand 5	B	431	432	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	392	396	first strand
Strand 2	B	369	373	parallel
Strand 3	B	413	417	parallel
Strand 4	B	344	353	anti-parallel
Strand 5	B	438	443	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6H30

Analysis of interatomic Contacts of Structural Units in PDB entry:
6H30