Analysis of interatomic Contacts of Structural Units in PDB entry:
6H3A


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6H3A entry

There are 4 chains in PDB entry 6H3A (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
D
 LEU 151GLY 203
A
 LEU 59ILE 408
B
 SER 146GLY 202
F
 LEU 59VAL 409
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 6H3A. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
D
151 169Right-handed alpha
Helix 2
AA2
D
173 184Right-handed alpha
Helix 3
AA3
D
187 198Right-handed alpha
Helix 4
AA4
A
73 76Right-handed 310
Helix 5
AA5
A
125 129Right-handed 310
Helix 6
AA6
A
229 235Right-handed alpha
Helix 7
AA7
A
244 355Right-handed alpha
Helix 8
AA8
A
359 365Right-handed alpha
Helix 9
AA9
A
366 379Right-handed alpha
Helix 10
AB1
A
391 395Right-handed 310
Helix 11
AB2
A
398 408Right-handed alpha
Helix 12
AB3
B
147 168Right-handed alpha
Helix 13
AB4
B
173 184Right-handed alpha
Helix 14
AB5
B
189 198Right-handed alpha
Helix 15
AB6
F
73 76Right-handed 310
Helix 16
AB7
F
125 129Right-handed 310
Helix 17
AB8
F
244 329Right-handed alpha
Helix 18
AB9
F
329 355Right-handed alpha
Helix 19
AC1
F
359 365Right-handed alpha
Helix 20
AC2
F
366 377Right-handed alpha
Helix 21
AC3
F
391 395Right-handed 310
Helix 22
AC4
F
398 409Right-handed alpha
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There are 4 sheets in PDB entry 6H3A. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
86 88first strand
Strand 2
A
78 80anti-parallel
Strand 3
A
130 131anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
219 221first strand
Strand 2
A
226 228anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
86 88first strand
Strand 2
F
78 80anti-parallel
Strand 3
F
130 131anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
226 228first strand
Strand 2
F
219 221anti-parallel
Strand 3
F
242 243anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il