Analysis of interatomic Contacts of Structural Units in PDB entry:
6H3C

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6H3C entry

There are 10 chains in PDB entry 6H3C (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	LYS 255
B	ALA 8	GLU 316
C	MET 1	LEU 383
D	GLU 81	GLU 317
F	MET 1	LYS 255
G	ALA 8	GLU 316
H	MET 1	LEU 383
I	GLU 81	GLU 317
E	TRP 22	ASP 481
J	TRP 22	ASP 481

There are116 helices in PDB entry 6H3C. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	6	19	Right-handed alpha
Helix 2	AA2	A	76	85	Right-handed alpha
Helix 3	AA3	A	106	120	Right-handed alpha
Helix 4	AA4	A	164	168	Right-handed 310
Helix 5	AA5	A	182	192	Right-handed alpha
Helix 6	AA6	A	193	196	Right-handed 310
Helix 7	AA7	A	203	255	Right-handed alpha
Helix 8	AA8	B	16	27	Right-handed alpha
Helix 9	AA9	B	93	112	Right-handed alpha
Helix 10	AB1	B	132	146	Right-handed alpha
Helix 11	AB2	B	225	232	Right-handed alpha
Helix 12	AB3	B	234	252	Right-handed alpha
Helix 13	AB4	B	257	279	Right-handed alpha
Helix 14	AB5	B	279	316	Right-handed alpha
Helix 15	AB6	C	2	9	Right-handed alpha
Helix 16	AB7	C	14	24	Right-handed alpha
Helix 17	AB8	C	86	90	Right-handed 310
Helix 18	AB9	C	99	104	Right-handed alpha
Helix 19	AC1	C	109	111	Right-handed 310
Helix 20	AC2	C	112	133	Right-handed alpha
Helix 21	AC3	C	135	147	Right-handed alpha
Helix 22	AC4	C	148	154	Right-handed 310
Helix 23	AC5	C	224	230	Right-handed alpha
Helix 24	AC6	C	231	234	Right-handed 310
Helix 25	AC7	C	245	280	Right-handed alpha
Helix 26	AC8	C	354	377	Right-handed alpha
Helix 27	AC9	D	102	107	Right-handed 310
Helix 28	AD1	D	119	135	Right-handed alpha
Helix 29	AD2	D	162	171	Right-handed alpha
Helix 30	AD3	D	183	192	Right-handed alpha
Helix 31	AD4	D	229	238	Right-handed alpha
Helix 32	AD5	D	250	255	Right-handed alpha
Helix 33	AD6	D	259	269	Right-handed alpha
Helix 34	AD7	D	270	272	Right-handed 310
Helix 35	AD8	D	287	292	Right-handed alpha
Helix 36	AD9	D	292	299	Right-handed alpha
Helix 37	AE1	D	307	311	Right-handed 310
Helix 38	AE2	F	6	19	Right-handed alpha
Helix 39	AE3	F	76	85	Right-handed alpha
Helix 40	AE4	F	106	120	Right-handed alpha
Helix 41	AE5	F	164	168	Right-handed 310
Helix 42	AE6	F	182	192	Right-handed alpha
Helix 43	AE7	F	193	196	Right-handed 310
Helix 44	AE8	F	203	255	Right-handed alpha
Helix 45	AE9	G	16	27	Right-handed alpha
Helix 46	AF1	G	93	112	Right-handed alpha
Helix 47	AF2	G	132	146	Right-handed alpha
Helix 48	AF3	G	225	232	Right-handed alpha
Helix 49	AF4	G	234	252	Right-handed alpha
Helix 50	AF5	G	257	279	Right-handed alpha
Helix 51	AF6	G	279	316	Right-handed alpha
Helix 52	AF7	H	2	9	Right-handed alpha
Helix 53	AF8	H	14	24	Right-handed alpha
Helix 54	AF9	H	86	90	Right-handed 310
Helix 55	AG1	H	99	104	Right-handed alpha
Helix 56	AG2	H	109	111	Right-handed 310
Helix 57	AG3	H	112	133	Right-handed alpha
Helix 58	AG4	H	135	147	Right-handed alpha
Helix 59	AG5	H	148	154	Right-handed 310
Helix 60	AG6	H	224	230	Right-handed alpha
Helix 61	AG7	H	231	234	Right-handed 310
Helix 62	AG8	H	245	280	Right-handed alpha
Helix 63	AG9	H	354	377	Right-handed alpha
Helix 64	AH1	I	102	107	Right-handed 310
Helix 65	AH2	I	119	135	Right-handed alpha
Helix 66	AH3	I	162	171	Right-handed alpha
Helix 67	AH4	I	183	192	Right-handed alpha
Helix 68	AH5	I	229	238	Right-handed alpha
Helix 69	AH6	I	250	255	Right-handed alpha
Helix 70	AH7	I	259	269	Right-handed alpha
Helix 71	AH8	I	270	272	Right-handed 310
Helix 72	AH9	I	287	292	Right-handed alpha
Helix 73	AI1	I	292	299	Right-handed alpha
Helix 74	AI2	I	307	311	Right-handed 310
Helix 75	AI3	E	27	32	Right-handed alpha
Helix 76	AI4	E	32	48	Right-handed alpha
Helix 77	AI5	E	60	68	Right-handed alpha
Helix 78	AI6	E	69	74	Right-handed 310
Helix 79	AI7	E	88	105	Right-handed alpha
Helix 80	AI8	E	124	134	Right-handed alpha
Helix 81	AI9	E	184	196	Right-handed alpha
Helix 82	AJ1	E	212	223	Right-handed alpha
Helix 83	AJ2	E	234	240	Right-handed alpha
Helix 84	AJ3	E	245	249	Right-handed 310
Helix 85	AJ4	E	290	295	Right-handed alpha
Helix 86	AJ5	E	296	298	Right-handed 310
Helix 87	AJ6	E	307	322	Right-handed alpha
Helix 88	AJ7	E	323	347	Right-handed alpha
Helix 89	AJ8	E	353	355	Right-handed 310
Helix 90	AJ9	E	366	369	Right-handed 310
Helix 91	AK1	E	371	381	Right-handed alpha
Helix 92	AK2	E	407	412	Right-handed alpha
Helix 93	AK3	E	416	439	Right-handed alpha
Helix 94	AK4	E	443	454	Right-handed alpha
Helix 95	AK5	E	454	473	Right-handed alpha
Helix 96	AK6	J	27	32	Right-handed alpha
Helix 97	AK7	J	32	48	Right-handed alpha
Helix 98	AK8	J	60	68	Right-handed alpha
Helix 99	AK9	J	69	74	Right-handed 310
Helix 100	AL1	J	88	105	Right-handed alpha
Helix 101	AL2	J	124	134	Right-handed alpha
Helix 102	AL3	J	184	196	Right-handed alpha
Helix 103	AL4	J	212	223	Right-handed alpha
Helix 104	AL5	J	234	240	Right-handed alpha
Helix 105	AL6	J	245	249	Right-handed 310
Helix 106	AL7	J	290	295	Right-handed alpha
Helix 107	AL8	J	296	298	Right-handed 310
Helix 108	AL9	J	307	322	Right-handed alpha
Helix 109	AM1	J	323	347	Right-handed alpha
Helix 110	AM2	J	353	355	Right-handed 310
Helix 111	AM3	J	366	369	Right-handed 310
Helix 112	AM4	J	371	381	Right-handed alpha
Helix 113	AM5	J	407	412	Right-handed alpha
Helix 114	AM6	J	416	439	Right-handed alpha
Helix 115	AM7	J	443	454	Right-handed alpha
Helix 116	AM8	J	454	473	Right-handed alpha

There are 24 sheets in PDB entry 6H3C. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	154	157	first strand
Strand 2	A	140	151	anti-parallel
Strand 3	B	166	175	anti-parallel
Strand 4	B	211	213	anti-parallel

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There are 14 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	160	161	first strand
Strand 2	A	2	5	parallel
Strand 3	A	50	61	parallel
Strand 4	A	24	36	anti-parallel
Strand 5	A	93	99	anti-parallel
Strand 6	A	126	134	parallel
Strand 7	A	140	151	anti-parallel
Strand 8	B	166	175	anti-parallel
Strand 9	B	151	159	anti-parallel
Strand 10	B	116	124	parallel
Strand 11	B	36	44	anti-parallel
Strand 12	B	70	79	anti-parallel
Strand 13	B	11	15	parallel
Strand 14	B	216	219	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	69	70	first strand
Strand 2	A	74	75	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	36	41	first strand
Strand 2	C	55	59	anti-parallel
Strand 3	C	70	72	anti-parallel
Strand 4	C	83	85	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	156	159	first strand
Strand 2	C	171	176	anti-parallel
Strand 3	C	201	207	anti-parallel
Strand 4	C	218	221	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	286	288	first strand
Strand 2	C	296	301	anti-parallel
Strand 3	C	308	313	anti-parallel
Strand 4	C	324	333	anti-parallel
Strand 5	C	339	344	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	155	160	first strand
Strand 2	D	143	148	anti-parallel
Strand 3	D	93	99	parallel
Strand 4	D	209	217	parallel
Strand 5	D	241	249	parallel
Strand 6	D	279	283	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	110	111	first strand
Strand 2	D	117	118	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	154	157	first strand
Strand 2	F	140	151	anti-parallel
Strand 3	G	166	175	anti-parallel
Strand 4	G	211	213	anti-parallel

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There are 14 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	160	161	first strand
Strand 2	F	2	5	parallel
Strand 3	F	50	61	parallel
Strand 4	F	24	36	anti-parallel
Strand 5	F	93	99	anti-parallel
Strand 6	F	126	134	parallel
Strand 7	F	140	151	anti-parallel
Strand 8	G	166	175	anti-parallel
Strand 9	G	151	159	anti-parallel
Strand 10	G	116	124	parallel
Strand 11	G	36	44	anti-parallel
Strand 12	G	70	79	anti-parallel
Strand 13	G	11	15	parallel
Strand 14	G	216	219	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	69	70	first strand
Strand 2	F	74	75	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	36	41	first strand
Strand 2	H	55	59	anti-parallel
Strand 3	H	70	72	anti-parallel
Strand 4	H	83	85	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	156	159	first strand
Strand 2	H	171	176	anti-parallel
Strand 3	H	201	207	anti-parallel
Strand 4	H	218	221	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	286	288	first strand
Strand 2	H	296	301	anti-parallel
Strand 3	H	308	313	anti-parallel
Strand 4	H	324	333	anti-parallel
Strand 5	H	339	344	anti-parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	155	160	first strand
Strand 2	I	143	148	anti-parallel
Strand 3	I	93	99	parallel
Strand 4	I	209	217	parallel
Strand 5	I	241	249	parallel
Strand 6	I	279	283	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	110	111	first strand
Strand 2	I	117	118	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	50	51	first strand
Strand 2	E	384	385	parallel

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There are 7 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	113	116	first strand
Strand 2	E	267	272	anti-parallel
Strand 3	E	252	256	anti-parallel
Strand 4	E	226	230	parallel
Strand 5	E	199	203	parallel
Strand 6	E	139	142	parallel
Strand 7	E	170	172	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	275	278	first strand
Strand 2	E	285	287	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	350	351	first strand
Strand 2	E	360	364	anti-parallel
Strand 3	E	402	406	anti-parallel
Strand 4	E	387	389	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	50	51	first strand
Strand 2	J	384	385	parallel

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There are 7 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	113	116	first strand
Strand 2	J	267	272	anti-parallel
Strand 3	J	252	256	anti-parallel
Strand 4	J	226	230	parallel
Strand 5	J	199	203	parallel
Strand 6	J	139	142	parallel
Strand 7	J	170	172	parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	275	278	first strand
Strand 2	J	285	287	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	350	351	first strand
Strand 2	J	360	364	anti-parallel
Strand 3	J	402	406	anti-parallel
Strand 4	J	387	389	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6H3C

Analysis of interatomic Contacts of Structural Units in PDB entry:
6H3C