Analysis of interatomic Contacts of Structural Units in PDB entry:
6H3H

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6H3H entry

There are 4 chains in PDB entry 6H3H (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 1	SER 222
B	GLN 1	SER 215
C	GLN 1	ALA 219
D	GLN 1	SER 215

There are 19 helices in PDB entry 6H3H. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	28	32	Right-handed 310
Helix 2	AA2	A	61	66	Right-handed alpha
Helix 3	AA3	A	74	76	Right-handed 310
Helix 4	AA4	A	87	91	Right-handed 310
Helix 5	AA5	A	162	164	Right-handed 310
Helix 6	AA6	A	206	209	Right-handed 310
Helix 7	AA7	B	30	34	Right-handed 310
Helix 8	AA8	B	81	85	Right-handed 310
Helix 9	AA9	B	124	129	Right-handed alpha
Helix 10	AB1	B	185	190	Right-handed alpha
Helix 11	AB2	C	28	32	Right-handed 310
Helix 12	AB3	C	61	66	Right-handed alpha
Helix 13	AB4	C	87	91	Right-handed 310
Helix 14	AB5	C	162	164	Right-handed 310
Helix 15	AB6	C	206	209	Right-handed 310
Helix 16	AB7	D	30	34	Right-handed 310
Helix 17	AB8	D	81	85	Right-handed 310
Helix 18	AB9	D	124	129	Right-handed alpha
Helix 19	AC1	D	185	190	Right-handed alpha

There are 24 sheets in PDB entry 6H3H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3	6	first strand
Strand 2	A	18	25	anti-parallel
Strand 3	A	78	83	anti-parallel
Strand 4	A	68	73	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	10	12	first strand
Strand 2	A	113	117	parallel
Strand 3	A	92	100	anti-parallel
Strand 4	A	33	40	anti-parallel
Strand 5	A	44	51	anti-parallel
Strand 6	A	58	60	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	10	12	first strand
Strand 2	A	113	117	parallel
Strand 3	A	92	100	anti-parallel
Strand 4	A	105	109	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	126	130	first strand
Strand 2	A	141	151	anti-parallel
Strand 3	A	180	190	anti-parallel
Strand 4	A	169	171	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	126	130	first strand
Strand 2	A	141	151	anti-parallel
Strand 3	A	180	190	anti-parallel
Strand 4	A	175	177	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	157	160	first strand
Strand 2	A	200	205	anti-parallel
Strand 3	A	210	215	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	4	6	first strand
Strand 2	B	18	24	anti-parallel
Strand 3	B	72	77	anti-parallel
Strand 4	B	64	69	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	9	12	first strand
Strand 2	B	104	108	parallel
Strand 3	B	86	93	anti-parallel
Strand 4	B	36	41	anti-parallel
Strand 5	B	45	51	anti-parallel
Strand 6	B	55	56	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	9	12	first strand
Strand 2	B	104	108	parallel
Strand 3	B	86	93	anti-parallel
Strand 4	B	98	100	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	117	121	first strand
Strand 2	B	132	142	anti-parallel
Strand 3	B	175	184	anti-parallel
Strand 4	B	162	164	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	117	121	first strand
Strand 2	B	132	142	anti-parallel
Strand 3	B	175	184	anti-parallel
Strand 4	B	168	169	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	156	158	first strand
Strand 2	B	148	153	anti-parallel
Strand 3	B	193	200	anti-parallel
Strand 4	B	203	210	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	3	6	first strand
Strand 2	C	18	25	anti-parallel
Strand 3	C	78	83	anti-parallel
Strand 4	C	68	73	anti-parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	10	12	first strand
Strand 2	C	113	117	parallel
Strand 3	C	92	100	anti-parallel
Strand 4	C	33	40	anti-parallel
Strand 5	C	44	51	anti-parallel
Strand 6	C	58	60	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	10	12	first strand
Strand 2	C	113	117	parallel
Strand 3	C	92	100	anti-parallel
Strand 4	C	105	109	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	126	130	first strand
Strand 2	C	142	151	anti-parallel
Strand 3	C	180	189	anti-parallel
Strand 4	C	169	171	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	126	130	first strand
Strand 2	C	142	151	anti-parallel
Strand 3	C	180	189	anti-parallel
Strand 4	C	175	177	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	157	160	first strand
Strand 2	C	200	205	anti-parallel
Strand 3	C	210	215	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	4	6	first strand
Strand 2	D	17	24	anti-parallel
Strand 3	D	72	78	anti-parallel
Strand 4	D	64	69	anti-parallel

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There are 6 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	9	12	first strand
Strand 2	D	104	108	parallel
Strand 3	D	86	93	anti-parallel
Strand 4	D	36	41	anti-parallel
Strand 5	D	45	51	anti-parallel
Strand 6	D	55	56	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	9	12	first strand
Strand 2	D	104	108	parallel
Strand 3	D	86	93	anti-parallel
Strand 4	D	98	100	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	117	121	first strand
Strand 2	D	132	142	anti-parallel
Strand 3	D	175	184	anti-parallel
Strand 4	D	162	164	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	117	121	first strand
Strand 2	D	132	142	anti-parallel
Strand 3	D	175	184	anti-parallel
Strand 4	D	168	169	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	156	157	first strand
Strand 2	D	148	153	anti-parallel
Strand 3	D	194	200	anti-parallel
Strand 4	D	203	209	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6H3H

Analysis of interatomic Contacts of Structural Units in PDB entry:
6H3H