Analysis of interatomic Contacts of Structural Units in PDB entry:
6H3I

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6H3I entry

There are 3 chains in PDB entry 6H3I (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 132	PHE 2401
B	ASP 22	ASN 176
F	ASP 21	TYR 402

There are 37 helices in PDB entry 6H3I. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	182	186	Right-handed 310
Helix 2	AA2	A	295	306	Right-handed alpha
Helix 3	AA3	A	359	363	Right-handed 310
Helix 4	AA4	A	382	386	Right-handed 310
Helix 5	AA5	A	409	413	Right-handed 310
Helix 6	AA6	A	517	523	Right-handed alpha
Helix 7	AA7	A	578	583	Right-handed alpha
Helix 8	AA8	A	627	634	Right-handed alpha
Helix 9	AA9	A	656	660	Right-handed 310
Helix 10	AB1	A	730	735	Right-handed alpha
Helix 11	AB2	A	810	819	Right-handed alpha
Helix 12	AB3	A	845	849	Right-handed 310
Helix 13	AB4	A	914	920	Right-handed alpha
Helix 14	AB5	A	939	944	Right-handed alpha
Helix 15	AB6	A	982	986	Right-handed 310
Helix 16	AB7	A	998	1003	Right-handed alpha
Helix 17	AB8	A	1081	1089	Right-handed alpha
Helix 18	AB9	A	1127	1132	Right-handed alpha
Helix 19	AC1	A	1412	1417	Right-handed alpha
Helix 20	AC2	A	1426	1439	Right-handed alpha
Helix 21	AC3	A	1571	1576	Right-handed 310
Helix 22	AC4	A	1607	1613	Right-handed alpha
Helix 23	AC5	A	1617	1622	Right-handed alpha
Helix 24	AC6	A	1856	1861	Right-handed alpha
Helix 25	AC7	A	1978	1982	Right-handed 310
Helix 26	AC8	A	1989	1995	Right-handed alpha
Helix 27	AC9	A	2072	2076	Right-handed 310
Helix 28	AD1	A	2084	2104	Right-handed alpha
Helix 29	AD2	A	2107	2111	Right-handed 310
Helix 30	AD3	A	2129	2135	Right-handed alpha
Helix 31	AD4	A	2147	2152	Right-handed alpha
Helix 32	AD5	A	2152	2161	Right-handed alpha
Helix 33	AD6	B	27	42	Right-handed alpha
Helix 34	AD7	B	126	133	Right-handed alpha
Helix 35	AD8	F	61	66	Right-handed 310
Helix 36	AD9	F	286	297	Right-handed alpha
Helix 37	AE1	F	299	307	Right-handed alpha

There are 26 sheets in PDB entry 6H3I. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	138	140	first strand
Strand 2	A	176	181	anti-parallel
Strand 3	A	188	194	anti-parallel
Strand 4	A	204	208	anti-parallel

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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	141	143	first strand
Strand 2	A	2395	2401	anti-parallel
Strand 3	A	2367	2377	anti-parallel
Strand 4	A	2351	2362	anti-parallel
Strand 5	A	2321	2331	anti-parallel
Strand 6	A	2291	2294	anti-parallel

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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	166	170	first strand
Strand 2	A	148	153	anti-parallel
Strand 3	A	2389	2392	anti-parallel
Strand 4	A	2374	2377	anti-parallel

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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	240	244	first strand
Strand 2	A	257	261	anti-parallel

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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	276	280	first strand
Strand 2	A	678	683	anti-parallel
Strand 3	A	541	545	anti-parallel

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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	291	293	first strand
Strand 2	A	447	449	anti-parallel

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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	703	705	first strand
Strand 2	A	741	743	anti-parallel

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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	754	760	first strand
Strand 2	A	776	782	anti-parallel
Strand 3	A	796	800	anti-parallel
Strand 4	A	839	841	anti-parallel

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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	763	766	first strand
Strand 2	A	770	773	anti-parallel

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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	831	835	first strand
Strand 2	A	1523	1527	anti-parallel

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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	866	869	first strand
Strand 2	A	1258	1261	anti-parallel
Strand 3	A	1004	1012	anti-parallel
Strand 4	A	1213	1219	anti-parallel

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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	909	911	first strand
Strand 2	A	961	963	anti-parallel

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There are 4 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	989	991	first strand
Strand 2	A	1237	1244	anti-parallel
Strand 3	A	1027	1034	anti-parallel
Strand 4	A	1178	1181	anti-parallel

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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1283	1288	first strand
Strand 2	A	1329	1334	anti-parallel

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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1343	1347	first strand
Strand 2	A	1486	1490	anti-parallel

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There are 4 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1540	1542	first strand
Strand 2	A	1559	1563	anti-parallel
Strand 3	A	1594	1597	anti-parallel
Strand 4	A	1629	1631	anti-parallel

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There are 7 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1564	1567	first strand
Strand 2	A	1587	1592	anti-parallel
Strand 3	A	1632	1638	anti-parallel
Strand 4	A	1665	1671	anti-parallel
Strand 5	A	1676	1683	anti-parallel
Strand 6	A	1738	1744	anti-parallel
Strand 7	A	1757	1760	anti-parallel

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There are 11 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1686	1689	first strand
Strand 2	A	1730	1735	anti-parallel
Strand 3	A	1763	1769	anti-parallel
Strand 4	A	1785	1789	anti-parallel
Strand 5	A	1816	1827	anti-parallel
Strand 6	A	1844	1853	anti-parallel
Strand 7	A	1876	1886	anti-parallel
Strand 8	A	1950	1959	anti-parallel
Strand 9	A	2008	2013	anti-parallel
Strand 10	A	2035	2039	anti-parallel
Strand 11	A	2063	2067	anti-parallel

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There are 3 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2181	2184	first strand
Strand 2	A	2201	2205	anti-parallel
Strand 3	A	2254	2256	anti-parallel

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There are 3 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2207	2212	first strand
Strand 2	A	2243	2249	anti-parallel
Strand 3	A	2271	2277	anti-parallel

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There are 2 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2283	2287	first strand
Strand 2	A	2334	2338	anti-parallel

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There are 2 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2297	2300	first strand
Strand 2	A	2321	2324	anti-parallel

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There are 3 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	318	325	first strand
Strand 2	A	460	466	anti-parallel
Strand 3	A	506	509	anti-parallel

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There are 5 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	118	120	first strand
Strand 2	B	97	100	anti-parallel
Strand 3	B	166	174	anti-parallel
Strand 4	B	141	146	anti-parallel
Strand 5	B	54	59	anti-parallel

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There are 2 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	101	104	first strand
Strand 2	B	110	114	anti-parallel

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There are 14 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	389	394	first strand
Strand 2	F	72	78	anti-parallel
Strand 3	F	88	98	anti-parallel
Strand 4	F	104	116	anti-parallel
Strand 5	F	139	146	anti-parallel
Strand 6	F	152	162	anti-parallel
Strand 7	F	178	189	anti-parallel
Strand 8	F	201	208	anti-parallel
Strand 9	F	231	240	anti-parallel
Strand 10	F	246	254	anti-parallel
Strand 11	F	323	328	anti-parallel
Strand 12	F	336	344	anti-parallel
Strand 13	F	357	362	anti-parallel
Strand 14	F	367	372	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6H3I

Analysis of interatomic Contacts of Structural Units in PDB entry:
6H3I