Analysis of interatomic Contacts of Structural Units in PDB entry:
6H3L

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6H3L entry

There are 3 chains in PDB entry 6H3L (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 5	PRO 640
B	ARG 5	PRO 640
C	ARG 5	PRO 640

There are 32 helices in PDB entry 6H3L. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	14	16	Right-handed 310
Helix 2	AA2	A	63	65	Right-handed 310
Helix 3	AA3	A	95	102	Right-handed 310
Helix 4	AA4	A	114	126	Right-handed alpha
Helix 5	AA5	A	151	161	Right-handed alpha
Helix 6	AA6	A	182	186	Right-handed 310
Helix 7	AA7	A	199	203	Right-handed 310
Helix 8	AA8	A	264	283	Right-handed alpha
Helix 9	AA9	A	308	312	Right-handed 310
Helix 10	AB1	A	437	439	Right-handed 310
Helix 11	AB2	A	626	637	Right-handed alpha
Helix 12	AB3	B	47	51	Right-handed 310
Helix 13	AB4	B	63	65	Right-handed 310
Helix 14	AB5	B	95	102	Right-handed 310
Helix 15	AB6	B	114	126	Right-handed alpha
Helix 16	AB7	B	151	163	Right-handed alpha
Helix 17	AB8	B	182	186	Right-handed 310
Helix 18	AB9	B	199	203	Right-handed 310
Helix 19	AC1	B	264	281	Right-handed alpha
Helix 20	AC2	B	308	312	Right-handed 310
Helix 21	AC3	B	437	439	Right-handed 310
Helix 22	AC4	B	625	637	Right-handed alpha
Helix 23	AC5	C	47	51	Right-handed 310
Helix 24	AC6	C	63	65	Right-handed 310
Helix 25	AC7	C	95	102	Right-handed 310
Helix 26	AC8	C	113	126	Right-handed alpha
Helix 27	AC9	C	151	163	Right-handed alpha
Helix 28	AD1	C	182	186	Right-handed 310
Helix 29	AD2	C	199	203	Right-handed 310
Helix 30	AD3	C	264	281	Right-handed alpha
Helix 31	AD4	C	437	439	Right-handed 310
Helix 32	AD5	C	625	637	Right-handed alpha

There are 28 sheets in PDB entry 6H3L. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	7	10	first strand
Strand 2	A	55	61	anti-parallel
Strand 3	A	67	73	anti-parallel

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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	77	80	first strand
Strand 2	A	87	94	anti-parallel
Strand 3	A	34	41	anti-parallel
Strand 4	A	18	28	anti-parallel
Strand 5	A	315	325	anti-parallel
Strand 6	A	339	348	anti-parallel
Strand 7	A	284	290	anti-parallel
Strand 8	A	210	217	anti-parallel

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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	107	109	first strand
Strand 2	A	144	146	anti-parallel

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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	130	132	first strand
Strand 2	A	177	179	parallel

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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	194	196	first strand
Strand 2	A	300	304	parallel
Strand 3	A	314	316	anti-parallel

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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	240	243	first strand
Strand 2	A	223	226	anti-parallel
Strand 3	A	254	257	parallel

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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	389	392	first strand
Strand 2	A	368	373	anti-parallel
Strand 3	A	430	435	anti-parallel
Strand 4	A	443	449	anti-parallel

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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	466	469	first strand
Strand 2	A	484	488	anti-parallel
Strand 3	A	495	499	anti-parallel

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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	567	572	first strand
Strand 2	A	575	580	anti-parallel
Strand 3	A	585	588	anti-parallel

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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	8	10	first strand
Strand 2	B	57	61	anti-parallel
Strand 3	B	67	69	anti-parallel

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There are 8 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	73	80	first strand
Strand 2	B	87	94	anti-parallel
Strand 3	B	34	41	anti-parallel
Strand 4	B	18	28	anti-parallel
Strand 5	B	315	325	anti-parallel
Strand 6	B	339	348	anti-parallel
Strand 7	B	284	290	anti-parallel
Strand 8	B	210	217	anti-parallel

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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	107	109	first strand
Strand 2	B	144	146	anti-parallel

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There are 3 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	130	133	first strand
Strand 2	B	174	180	parallel
Strand 3	B	165	171	anti-parallel

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There are 3 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	240	243	first strand
Strand 2	B	223	226	anti-parallel
Strand 3	B	254	257	parallel

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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	300	302	first strand
Strand 2	B	314	316	anti-parallel

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There are 4 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	389	392	first strand
Strand 2	B	368	373	anti-parallel
Strand 3	B	430	435	anti-parallel
Strand 4	B	443	448	anti-parallel

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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	414	416	first strand
Strand 2	B	419	421	anti-parallel

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There are 3 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	466	470	first strand
Strand 2	B	484	490	anti-parallel
Strand 3	B	493	499	anti-parallel

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There are 3 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	567	572	first strand
Strand 2	B	575	580	anti-parallel
Strand 3	B	585	588	anti-parallel

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There are 8 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	73	80	first strand
Strand 2	C	87	94	anti-parallel
Strand 3	C	34	41	anti-parallel
Strand 4	C	19	28	anti-parallel
Strand 5	C	315	325	anti-parallel
Strand 6	C	339	348	anti-parallel
Strand 7	C	284	290	anti-parallel
Strand 8	C	210	217	anti-parallel

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There are 2 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	59	61	first strand
Strand 2	C	67	69	anti-parallel

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There are 2 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	107	109	first strand
Strand 2	C	144	146	anti-parallel

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There are 3 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	130	133	first strand
Strand 2	C	174	180	parallel
Strand 3	C	165	171	anti-parallel

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There are 3 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	194	196	first strand
Strand 2	C	300	304	parallel
Strand 3	C	314	316	anti-parallel

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There are 3 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	240	243	first strand
Strand 2	C	223	226	anti-parallel
Strand 3	C	254	256	parallel

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There are 4 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	389	392	first strand
Strand 2	C	368	373	anti-parallel
Strand 3	C	430	435	anti-parallel
Strand 4	C	443	448	anti-parallel

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There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	466	470	first strand
Strand 2	C	484	488	anti-parallel
Strand 3	C	495	499	anti-parallel

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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	567	572	first strand
Strand 2	C	575	580	anti-parallel
Strand 3	C	585	588	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6H3L

Analysis of interatomic Contacts of Structural Units in PDB entry:
6H3L