Analysis of interatomic Contacts of Structural Units in PDB entry:
6H3T

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6H3T entry

There are 6 chains in PDB entry 6H3T (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
H	GLU 1	VAL 111
L	ASP 1	LYS 107
A	THR 467	LEU 696
I	GLU 1	VAL 111
M	ASP 1	LYS 107
B	THR 467	THR 698

There are 43 helices in PDB entry 6H3T. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	H	61	64	Right-handed 310
Helix 2	AA2	L	79	83	Right-handed 310
Helix 3	AA3	A	475	479	Right-handed 310
Helix 4	AA4	A	480	486	Right-handed alpha
Helix 5	AA5	A	487	488	Right-handed 310
Helix 6	AA6	A	489	493	Right-handed 310
Helix 7	AA7	A	500	505	Right-handed alpha
Helix 8	AA8	A	509	520	Right-handed alpha
Helix 9	AA9	A	525	533	Right-handed alpha
Helix 10	AB1	A	535	550	Right-handed alpha
Helix 11	AB2	A	550	556	Right-handed alpha
Helix 12	AB3	A	557	559	Right-handed 310
Helix 13	AB4	A	562	575	Right-handed alpha
Helix 14	AB5	A	577	583	Right-handed alpha
Helix 15	AB6	A	586	595	Right-handed alpha
Helix 16	AB7	A	601	614	Right-handed alpha
Helix 17	AB8	A	616	635	Right-handed alpha
Helix 18	AB9	A	637	650	Right-handed alpha
Helix 19	AC1	A	651	653	Right-handed 310
Helix 20	AC2	A	654	663	Right-handed alpha
Helix 21	AC3	A	664	667	Right-handed 310
Helix 22	AC4	A	669	684	Right-handed alpha
Helix 23	AC5	M	79	83	Right-handed 310
Helix 24	AC6	B	475	479	Right-handed 310
Helix 25	AC7	B	480	486	Right-handed alpha
Helix 26	AC8	B	487	488	Right-handed 310
Helix 27	AC9	B	489	493	Right-handed 310
Helix 28	AD1	B	500	505	Right-handed alpha
Helix 29	AD2	B	509	520	Right-handed alpha
Helix 30	AD3	B	525	533	Right-handed alpha
Helix 31	AD4	B	535	550	Right-handed alpha
Helix 32	AD5	B	550	556	Right-handed alpha
Helix 33	AD6	B	557	559	Right-handed 310
Helix 34	AD7	B	562	575	Right-handed alpha
Helix 35	AD8	B	577	583	Right-handed alpha
Helix 36	AD9	B	586	594	Right-handed alpha
Helix 37	AE1	B	601	614	Right-handed alpha
Helix 38	AE2	B	616	635	Right-handed alpha
Helix 39	AE3	B	637	650	Right-handed alpha
Helix 40	AE4	B	651	653	Right-handed 310
Helix 41	AE5	B	654	663	Right-handed alpha
Helix 42	AE6	B	664	667	Right-handed 310
Helix 43	AE7	B	669	684	Right-handed alpha

There are 13 sheets in PDB entry 6H3T. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	3	6	first strand
Strand 2	H	18	25	anti-parallel
Strand 3	H	77	82	anti-parallel
Strand 4	H	67	72	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	10	11	first strand
Strand 2	H	107	110	parallel
Strand 3	H	88	95	anti-parallel
Strand 4	H	33	39	anti-parallel
Strand 5	H	45	51	anti-parallel
Strand 6	H	57	59	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	10	11	first strand
Strand 2	H	107	110	parallel
Strand 3	H	88	95	anti-parallel
Strand 4	H	100	103	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	4	6	first strand
Strand 2	L	19	25	anti-parallel
Strand 3	L	70	75	anti-parallel
Strand 4	L	62	67	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	10	14	first strand
Strand 2	L	102	107	parallel
Strand 3	L	84	90	anti-parallel
Strand 4	L	33	38	anti-parallel
Strand 5	L	45	49	anti-parallel
Strand 6	L	53	54	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	10	14	first strand
Strand 2	L	102	107	parallel
Strand 3	L	84	90	anti-parallel
Strand 4	L	97	98	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	27	27	first strand
Strand 2	L	30	31	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	3	6	first strand
Strand 2	I	18	25	anti-parallel
Strand 3	I	77	82	anti-parallel
Strand 4	I	67	72	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	10	11	first strand
Strand 2	I	107	110	parallel
Strand 3	I	88	95	anti-parallel
Strand 4	I	33	39	anti-parallel
Strand 5	I	45	51	anti-parallel
Strand 6	I	57	59	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	4	6	first strand
Strand 2	M	19	25	anti-parallel
Strand 3	M	70	75	anti-parallel
Strand 4	M	62	67	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	10	12	first strand
Strand 2	M	102	105	parallel
Strand 3	M	85	90	anti-parallel
Strand 4	M	33	38	anti-parallel
Strand 5	M	44	49	anti-parallel
Strand 6	M	53	54	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	10	12	first strand
Strand 2	M	102	105	parallel
Strand 3	M	85	90	anti-parallel
Strand 4	M	97	98	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	27	27	first strand
Strand 2	M	30	31	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6H3T

Analysis of interatomic Contacts of Structural Units in PDB entry:
6H3T