Analysis of interatomic
Contacts of Structural
Units in PDB entry:
Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332).
This page provides analyses of
contacts formed by:
For analysis of ligand-protein contacts, use:
3D structure can be seen in additional window with
STING software for 6H59 entry
There are 2 chains in PDB entry 6H59
(CSU analysis of residue contacts immediately below table)
| Chain ID |
Initial residue | Terminal residue |
A
|
ALA 13 | ILE 211 |
B
|
ILE 15 | ALA 210 |
Back to top of page
There are 14
helices in PDB entry 6H59. Click on helix of interest for
CSU analysis.
Helix number
| Helix ID | Chain ID |
Initial residue | Terminal residue |
Helix class |
| Helix 1 |
1 | A
| 15 |
26 | Right-handed alpha |
| Helix 2 |
2 | A
| 30 |
49 | Right-handed alpha |
| Helix 3 |
3 | A
| 55 |
78 | Right-handed alpha |
| Helix 4 |
4 | A
| 82 |
111 | Right-handed alpha |
| Helix 5 |
5 | A
| 115 |
141 | Right-handed alpha |
| Helix 6 |
6 | A
| 151 |
167 | Right-handed alpha |
| Helix 7 |
7 | A
| 174 |
201 | Right-handed 310 |
| Helix 8 |
8 | B
| 16 |
26 | Right-handed alpha |
| Helix 9 |
9 | B
| 30 |
49 | Right-handed alpha |
| Helix 10 |
10 | B
| 54 |
78 | Right-handed alpha |
| Helix 11 |
11 | B
| 83 |
111 | Right-handed alpha |
| Helix 12 |
12 | B
| 115 |
141 | Right-handed alpha |
| Helix 13 |
13 | B
| 151 |
167 | Right-handed alpha |
| Helix 14 |
14 | B
| 175 |
201 | Right-handed alpha |
Back to top of page
There is
1 sheet (AA1) in PDB entry 6H59.
There are 2
strands in AA1 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
| Strand 1 |
A
| 208 |
209 | first strand |
| Strand 2 |
B
| 81 |
82 | anti-parallel |
Back to top of page
Please mail
questions/suggestions concerning this page
to
Vladimir.Sobolev@weizmann.
ac.il