Analysis of interatomic Contacts of Structural Units in PDB entry:
6H5N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6H5N entry

There are 6 chains in PDB entry 6H5N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 294SER 427
B
 GLN 1ALA 212
C
 GLU 1PRO 218
D
 LYS 293SER 427
E
 GLN 1ALA 212
F
 GLU 1PRO 218
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 6H5N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
316 319Right-handed 310
Helix 2
AA2
A
372 376Right-handed alpha
Helix 3
AA3
B
82 86Right-handed 310
Helix 4
AA4
B
125 131Right-handed alpha
Helix 5
AA5
B
184 191Right-handed alpha
Helix 6
AA6
C
28 32Right-handed 310
Helix 7
AA7
C
87 91Right-handed 310
Helix 8
AA8
D
372 377Right-handed alpha
Helix 9
AA9
E
82 86Right-handed 310
Helix 10
AB1
E
125 131Right-handed alpha
Helix 11
AB2
E
184 191Right-handed alpha
Helix 12
AB3
F
28 32Right-handed 310
Helix 13
AB4
F
87 91Right-handed 310
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There are 29 sheets in PDB entry 6H5N. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
382 388first strand
Strand 2
A
391 400anti-parallel
Strand 3
A
336 344anti-parallel
Strand 4
A
295 299parallel
Strand 5
A
310 314parallel
Strand 6
D
324 331anti-parallel
Strand 7
D
417 425parallel
Strand 8
D
406 414anti-parallel
Strand 9
D
347 349anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
347 349first strand
Strand 2
A
406 414anti-parallel
Strand 3
A
417 425anti-parallel
Strand 4
A
326 331parallel
Strand 5
D
310 313anti-parallel
Strand 6
D
295 299parallel
Strand 7
D
336 344parallel
Strand 8
D
391 400anti-parallel
Strand 9
D
382 388anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
355 357first strand
Strand 2
A
369 371anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
4 5first strand
Strand 2
B
23 24anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
9 13first strand
Strand 2
B
105 110parallel
Strand 3
B
88 94anti-parallel
Strand 4
B
34 39anti-parallel
Strand 5
B
46 49anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
9 13first strand
Strand 2
B
105 110parallel
Strand 3
B
88 94anti-parallel
Strand 4
B
99 101anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
18 20first strand
Strand 2
B
73 78anti-parallel
Strand 3
B
63 68anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
118 122first strand
Strand 2
B
134 143anti-parallel
Strand 3
B
174 183anti-parallel
Strand 4
B
163 165anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
118 122first strand
Strand 2
B
134 143anti-parallel
Strand 3
B
174 183anti-parallel
Strand 4
B
169 171anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
157 159first strand
Strand 2
B
148 154anti-parallel
Strand 3
B
194 200anti-parallel
Strand 4
B
203 209anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
3 7first strand
Strand 2
C
18 25anti-parallel
Strand 3
C
78 83anti-parallel
Strand 4
C
68 73anti-parallel
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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
11 12first strand
Strand 2
C
113 117parallel
Strand 3
C
92 99anti-parallel
Strand 4
C
33 40anti-parallel
Strand 5
C
44 51anti-parallel
Strand 6
C
58 59anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
11 12first strand
Strand 2
C
113 117parallel
Strand 3
C
92 99anti-parallel
Strand 4
C
106 109anti-parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
126 130first strand
Strand 2
C
144 151anti-parallel
Strand 3
C
181 187anti-parallel
Strand 4
C
169 171anti-parallel
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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
157 160first strand
Strand 2
C
200 205anti-parallel
Strand 3
C
210 215anti-parallel
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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
355 357first strand
Strand 2
D
369 371anti-parallel
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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
4 5first strand
Strand 2
E
23 24anti-parallel
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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
9 13first strand
Strand 2
E
105 110parallel
Strand 3
E
88 94anti-parallel
Strand 4
E
34 39anti-parallel
Strand 5
E
46 49anti-parallel
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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
9 13first strand
Strand 2
E
105 110parallel
Strand 3
E
88 94anti-parallel
Strand 4
E
99 101anti-parallel
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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
18 20first strand
Strand 2
E
73 78anti-parallel
Strand 3
E
63 68anti-parallel
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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
118 122first strand
Strand 2
E
134 143anti-parallel
Strand 3
E
174 183anti-parallel
Strand 4
E
163 165anti-parallel
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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
118 122first strand
Strand 2
E
134 143anti-parallel
Strand 3
E
174 183anti-parallel
Strand 4
E
169 171anti-parallel
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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
157 158first strand
Strand 2
E
149 154anti-parallel
Strand 3
E
194 200anti-parallel
Strand 4
E
203 209anti-parallel
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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
3 7first strand
Strand 2
F
18 25anti-parallel
Strand 3
F
78 83anti-parallel
Strand 4
F
68 73anti-parallel
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There are 6 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
11 12first strand
Strand 2
F
113 117parallel
Strand 3
F
92 100anti-parallel
Strand 4
F
33 40anti-parallel
Strand 5
F
44 51anti-parallel
Strand 6
F
58 59anti-parallel
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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
11 12first strand
Strand 2
F
113 117parallel
Strand 3
F
92 100anti-parallel
Strand 4
F
105 109anti-parallel
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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
126 130first strand
Strand 2
F
144 151anti-parallel
Strand 3
F
181 187anti-parallel
Strand 4
F
169 171anti-parallel
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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
126 130first strand
Strand 2
F
144 151anti-parallel
Strand 3
F
181 187anti-parallel
Strand 4
F
175 176anti-parallel
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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
157 160first strand
Strand 2
F
200 205anti-parallel
Strand 3
F
210 215anti-parallel
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