Analysis of interatomic Contacts of Structural Units in PDB entry:
6H5O

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6H5O entry

There are 2 chains in PDB entry 6H5O (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 27	GLU 668
B	ASP 27	GLU 668

There are 61 helices in PDB entry 6H5O. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	27	39	Right-handed alpha
Helix 2	AA2	A	41	49	Right-handed alpha
Helix 3	AA3	A	50	58	Right-handed alpha
Helix 4	AA4	A	58	64	Right-handed alpha
Helix 5	AA5	A	64	74	Right-handed alpha
Helix 6	AA6	A	128	132	Right-handed 310
Helix 7	AA7	A	182	190	Right-handed alpha
Helix 8	AA8	A	193	200	Right-handed alpha
Helix 9	AA9	A	221	231	Right-handed alpha
Helix 10	AB1	A	245	248	Right-handed 310
Helix 11	AB2	A	249	254	Right-handed alpha
Helix 12	AB3	A	260	265	Right-handed alpha
Helix 13	AB4	A	282	287	Right-handed alpha
Helix 14	AB5	A	287	292	Right-handed alpha
Helix 15	AB6	A	329	339	Right-handed alpha
Helix 16	AB7	A	368	373	Right-handed alpha
Helix 17	AB8	A	376	385	Right-handed alpha
Helix 18	AB9	A	401	403	Right-handed 310
Helix 19	AC1	A	404	417	Right-handed alpha
Helix 20	AC2	A	458	462	Right-handed alpha
Helix 21	AC3	A	463	484	Right-handed alpha
Helix 22	AC4	A	485	487	Right-handed 310
Helix 23	AC5	A	510	520	Right-handed alpha
Helix 24	AC6	A	527	537	Right-handed alpha
Helix 25	AC7	A	538	540	Right-handed 310
Helix 26	AC8	A	564	581	Right-handed alpha
Helix 27	AC9	A	583	588	Right-handed alpha
Helix 28	AD1	A	636	639	Right-handed 310
Helix 29	AD2	A	640	657	Right-handed alpha
Helix 30	AD3	A	658	661	Right-handed 310
Helix 31	AD4	B	28	39	Right-handed alpha
Helix 32	AD5	B	41	49	Right-handed alpha
Helix 33	AD6	B	50	58	Right-handed alpha
Helix 34	AD7	B	58	64	Right-handed alpha
Helix 35	AD8	B	64	74	Right-handed alpha
Helix 36	AD9	B	128	132	Right-handed 310
Helix 37	AE1	B	179	181	Right-handed 310
Helix 38	AE2	B	182	188	Right-handed alpha
Helix 39	AE3	B	193	200	Right-handed alpha
Helix 40	AE4	B	221	231	Right-handed alpha
Helix 41	AE5	B	245	248	Right-handed 310
Helix 42	AE6	B	249	254	Right-handed alpha
Helix 43	AE7	B	282	287	Right-handed alpha
Helix 44	AE8	B	287	292	Right-handed alpha
Helix 45	AE9	B	329	339	Right-handed alpha
Helix 46	AF1	B	368	373	Right-handed alpha
Helix 47	AF2	B	376	385	Right-handed alpha
Helix 48	AF3	B	401	403	Right-handed 310
Helix 49	AF4	B	404	417	Right-handed alpha
Helix 50	AF5	B	435	439	Right-handed 310
Helix 51	AF6	B	455	462	Right-handed alpha
Helix 52	AF7	B	463	484	Right-handed alpha
Helix 53	AF8	B	485	487	Right-handed 310
Helix 54	AF9	B	510	517	Right-handed alpha
Helix 55	AG1	B	527	537	Right-handed alpha
Helix 56	AG2	B	538	540	Right-handed 310
Helix 57	AG3	B	564	581	Right-handed alpha
Helix 58	AG4	B	583	588	Right-handed alpha
Helix 59	AG5	B	636	640	Right-handed 310
Helix 60	AG6	B	641	657	Right-handed alpha
Helix 61	AG7	B	658	661	Right-handed 310

There are 15 sheets in PDB entry 6H5O. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	75	87	first strand
Strand 2	A	92	103	anti-parallel
Strand 3	A	106	119	anti-parallel
Strand 4	A	122	125	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	140	147	first strand
Strand 2	A	296	303	anti-parallel
Strand 3	A	308	316	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	212	217	first strand
Strand 2	A	161	173	anti-parallel
Strand 3	A	234	242	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	212	217	first strand
Strand 2	A	161	173	anti-parallel
Strand 3	A	154	155	anti-parallel
Strand 4	A	324	325	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	255	258	first strand
Strand 2	A	277	281	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	357	363	first strand
Strand 2	A	345	350	anti-parallel
Strand 3	A	628	631	anti-parallel
Strand 4	A	615	621	anti-parallel
Strand 5	A	594	600	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	544	545	first strand
Strand 2	A	557	559	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	75	89	first strand
Strand 2	B	92	103	anti-parallel
Strand 3	B	106	119	anti-parallel
Strand 4	B	122	125	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	140	147	first strand
Strand 2	B	296	303	anti-parallel
Strand 3	B	308	316	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	212	217	first strand
Strand 2	B	161	173	anti-parallel
Strand 3	B	234	242	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	212	217	first strand
Strand 2	B	161	173	anti-parallel
Strand 3	B	154	155	anti-parallel
Strand 4	B	324	325	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	256	258	first strand
Strand 2	B	277	279	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	357	363	first strand
Strand 2	B	345	350	anti-parallel
Strand 3	B	628	631	anti-parallel
Strand 4	B	615	621	anti-parallel
Strand 5	B	594	600	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	424	427	first strand
Strand 2	B	451	454	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	544	545	first strand
Strand 2	B	557	559	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6H5O

Analysis of interatomic Contacts of Structural Units in PDB entry:
6H5O