Analysis of interatomic Contacts of Structural Units in PDB entry:
6H65

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6H65 entry

There are 5 chains in PDB entry 6H65 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 12	TYR 316
B	PRO 12	GLU 317
C	LYS 10	GLU 317
D	PRO 12	TYR 316
E	ALA 11	ASN 52

There are 66 helices in PDB entry 6H65. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	26	28	Right-handed 310
Helix 2	AA2	A	34	40	Right-handed alpha
Helix 3	AA3	A	62	77	Right-handed alpha
Helix 4	AA4	A	84	99	Right-handed alpha
Helix 5	AA5	A	141	146	Right-handed alpha
Helix 6	AA6	A	168	171	Right-handed 310
Helix 7	AA7	A	172	185	Right-handed alpha
Helix 8	AA8	A	227	242	Right-handed alpha
Helix 9	AA9	A	251	257	Right-handed 310
Helix 10	AB1	A	287	302	Right-handed alpha
Helix 11	AB2	A	305	310	Right-handed 310
Helix 12	AB3	B	26	28	Right-handed 310
Helix 13	AB4	B	34	40	Right-handed alpha
Helix 14	AB5	B	62	77	Right-handed alpha
Helix 15	AB6	B	84	99	Right-handed alpha
Helix 16	AB7	B	141	146	Right-handed alpha
Helix 17	AB8	B	168	171	Right-handed 310
Helix 18	AB9	B	172	185	Right-handed alpha
Helix 19	AC1	B	227	242	Right-handed alpha
Helix 20	AC2	B	251	257	Right-handed 310
Helix 21	AC3	B	287	302	Right-handed alpha
Helix 22	AC4	B	305	310	Right-handed 310
Helix 23	AC5	C	26	28	Right-handed 310
Helix 24	AC6	C	34	40	Right-handed alpha
Helix 25	AC7	C	62	77	Right-handed alpha
Helix 26	AC8	C	84	99	Right-handed alpha
Helix 27	AC9	C	141	146	Right-handed alpha
Helix 28	AD1	C	168	171	Right-handed 310
Helix 29	AD2	C	172	185	Right-handed alpha
Helix 30	AD3	C	227	242	Right-handed alpha
Helix 31	AD4	C	251	257	Right-handed 310
Helix 32	AD5	C	287	302	Right-handed alpha
Helix 33	AD6	C	305	310	Right-handed 310
Helix 34	AD7	D	26	28	Right-handed 310
Helix 35	AD8	D	34	40	Right-handed alpha
Helix 36	AD9	D	62	77	Right-handed alpha
Helix 37	AE1	D	84	99	Right-handed alpha
Helix 38	AE2	D	141	146	Right-handed alpha
Helix 39	AE3	D	168	171	Right-handed 310
Helix 40	AE4	D	172	185	Right-handed alpha
Helix 41	AE5	D	227	242	Right-handed alpha
Helix 42	AE6	D	251	257	Right-handed 310
Helix 43	AE7	D	287	302	Right-handed alpha
Helix 44	AE8	D	305	310	Right-handed 310
Helix 45	AE9	E	26	28	Right-handed 310
Helix 46	AF1	E	34	40	Right-handed alpha
Helix 47	AF2	E	62	77	Right-handed alpha
Helix 48	AF3	E	84	99	Right-handed alpha
Helix 49	AF4	E	141	146	Right-handed alpha
Helix 50	AF5	E	168	171	Right-handed 310
Helix 51	AF6	E	172	185	Right-handed alpha
Helix 52	AF7	E	227	242	Right-handed alpha
Helix 53	AF8	E	251	257	Right-handed 310
Helix 54	AF9	E	287	302	Right-handed alpha
Helix 55	AG1	E	305	310	Right-handed 310
Helix 56	AG2	F	26	28	Right-handed 310
Helix 57	AG3	F	34	40	Right-handed alpha
Helix 58	AG4	F	62	77	Right-handed alpha
Helix 59	AG5	F	84	99	Right-handed alpha
Helix 60	AG6	F	141	146	Right-handed alpha
Helix 61	AG7	F	168	171	Right-handed 310
Helix 62	AG8	F	172	185	Right-handed alpha
Helix 63	AG9	F	227	242	Right-handed alpha
Helix 64	AH1	F	251	257	Right-handed 310
Helix 65	AH2	F	287	302	Right-handed alpha
Helix 66	AH3	F	305	310	Right-handed 310

There are 18 sheets in PDB entry 6H65. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	21	24	first strand
Strand 2	A	15	18	anti-parallel
Strand 3	A	128	136	anti-parallel
Strand 4	A	105	113	anti-parallel
Strand 5	A	42	52	anti-parallel
Strand 6	A	57	61	anti-parallel
Strand 7	A	312	314	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	189	193	first strand
Strand 2	A	147	155	parallel
Strand 3	A	269	276	parallel
Strand 4	A	260	265	anti-parallel
Strand 5	A	206	211	anti-parallel
Strand 6	A	214	217	anti-parallel
Strand 7	A	246	247	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	189	193	first strand
Strand 2	A	147	155	parallel
Strand 3	A	269	276	parallel
Strand 4	A	279	280	anti-parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	21	24	first strand
Strand 2	B	15	18	anti-parallel
Strand 3	B	128	136	anti-parallel
Strand 4	B	105	113	anti-parallel
Strand 5	B	42	52	anti-parallel
Strand 6	B	57	61	anti-parallel
Strand 7	B	312	314	anti-parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	189	191	first strand
Strand 2	B	147	151	parallel
Strand 3	B	269	276	parallel
Strand 4	B	260	265	anti-parallel
Strand 5	B	206	211	anti-parallel
Strand 6	B	214	217	anti-parallel
Strand 7	B	246	247	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	189	191	first strand
Strand 2	B	147	151	parallel
Strand 3	B	269	276	parallel
Strand 4	B	279	280	anti-parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	21	24	first strand
Strand 2	C	15	18	anti-parallel
Strand 3	C	128	136	anti-parallel
Strand 4	C	105	113	anti-parallel
Strand 5	C	42	52	anti-parallel
Strand 6	C	57	61	anti-parallel
Strand 7	C	312	314	anti-parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	189	193	first strand
Strand 2	C	147	155	parallel
Strand 3	C	269	276	parallel
Strand 4	C	260	265	anti-parallel
Strand 5	C	206	211	anti-parallel
Strand 6	C	214	217	anti-parallel
Strand 7	C	246	247	parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	189	193	first strand
Strand 2	C	147	155	parallel
Strand 3	C	269	276	parallel
Strand 4	C	279	280	anti-parallel

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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	21	24	first strand
Strand 2	D	15	18	anti-parallel
Strand 3	D	128	136	anti-parallel
Strand 4	D	105	113	anti-parallel
Strand 5	D	42	51	anti-parallel
Strand 6	D	58	61	anti-parallel
Strand 7	D	312	314	anti-parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	189	191	first strand
Strand 2	D	147	151	parallel
Strand 3	D	269	276	parallel
Strand 4	D	260	265	anti-parallel
Strand 5	D	206	211	anti-parallel
Strand 6	D	214	217	anti-parallel
Strand 7	D	246	247	parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	189	191	first strand
Strand 2	D	147	151	parallel
Strand 3	D	269	276	parallel
Strand 4	D	279	280	anti-parallel

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There are 7 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	21	24	first strand
Strand 2	E	15	18	anti-parallel
Strand 3	E	128	136	anti-parallel
Strand 4	E	105	113	anti-parallel
Strand 5	E	42	52	anti-parallel
Strand 6	E	57	61	anti-parallel
Strand 7	E	312	314	anti-parallel

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There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	189	191	first strand
Strand 2	E	147	151	parallel
Strand 3	E	269	276	parallel
Strand 4	E	260	265	anti-parallel
Strand 5	E	206	211	anti-parallel
Strand 6	E	214	217	anti-parallel
Strand 7	E	246	247	parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	189	191	first strand
Strand 2	E	147	151	parallel
Strand 3	E	269	276	parallel
Strand 4	E	279	280	anti-parallel

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There are 7 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	21	24	first strand
Strand 2	F	15	18	anti-parallel
Strand 3	F	128	136	anti-parallel
Strand 4	F	105	113	anti-parallel
Strand 5	F	42	52	anti-parallel
Strand 6	F	57	61	anti-parallel
Strand 7	F	312	314	anti-parallel

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There are 7 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	189	193	first strand
Strand 2	F	147	155	parallel
Strand 3	F	269	276	parallel
Strand 4	F	260	265	anti-parallel
Strand 5	F	206	211	anti-parallel
Strand 6	F	214	217	anti-parallel
Strand 7	F	246	247	parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	189	193	first strand
Strand 2	F	147	155	parallel
Strand 3	F	269	276	parallel
Strand 4	F	279	280	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6H65

Analysis of interatomic Contacts of Structural Units in PDB entry:
6H65