Analysis of interatomic Contacts of Structural Units in PDB entry:
6H66


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6H66 entry

There are 3 chains in PDB entry 6H66 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 307LEU 1020
X
 U 1 G 15
Y
 C 1 A 15
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 6H66. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
310 318Right-handed alpha
Helix 2
AA2
A
319 322Right-handed 310
Helix 3
AA3
A
335 355Right-handed alpha
Helix 4
AA4
A
366 377Right-handed alpha
Helix 5
AA5
A
377 383Right-handed alpha
Helix 6
AA6
A
400 407Right-handed alpha
Helix 7
AA7
A
415 428Right-handed alpha
Helix 8
AA8
A
434 438Right-handed 310
Helix 9
AA9
A
445 449Right-handed 310
Helix 10
AB1
A
455 476Right-handed alpha
Helix 11
AB2
A
499 515Right-handed alpha
Helix 12
AB3
A
525 533Right-handed alpha
Helix 13
AB4
A
550 567Right-handed alpha
Helix 14
AB5
A
576 592Right-handed alpha
Helix 15
AB6
A
599 616Right-handed alpha
Helix 16
AB7
A
619 643Right-handed alpha
Helix 17
AB8
A
670 692Right-handed alpha
Helix 18
AB9
A
700 716Right-handed alpha
Helix 19
AC1
A
728 741Right-handed alpha
Helix 20
AC2
A
767 781Right-handed alpha
Helix 21
AC3
A
790 796Right-handed alpha
Helix 22
AC4
A
813 823Right-handed alpha
Helix 23
AC5
A
840 863Right-handed alpha
Helix 24
AC6
A
865 895Right-handed alpha
Helix 25
AC7
A
984 987Right-handed 310
Helix 26
AC8
A
1002 1006Right-handed 310
Helix 27
AC9
A
1014 1019Right-handed 310
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There are 6 sheets in PDB entry 6H66. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
326 327first strand
Strand 2
A
484 487parallel
Strand 3
A
440 443parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
360 364first strand
Strand 2
A
410 414parallel
Strand 3
A
390 391parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
722 723first strand
Strand 2
A
785 787parallel
Strand 3
A
751 753parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
913 915first strand
Strand 2
A
905 906anti-parallel
Strand 3
A
988 989anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
921 923first strand
Strand 2
A
927 929anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
940 942first strand
Strand 2
A
959 961anti-parallel
Strand 3
A
967 974anti-parallel
Strand 4
A
977 982anti-parallel
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