Analysis of interatomic Contacts of Structural Units in PDB entry:
6H6A

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6H6A entry

There are 6 chains in PDB entry 6H6A (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
D	PRO 59	GLY 238
E	GLY 501	SER 506
G	PRO 59	GLY 238
H	GLY 501	CYS 504
J	PRO 59	GLY 238
K	GLY 501	CYS 504

There are 12 helices in PDB entry 6H6A. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	D	61	65	Right-handed 310
Helix 2	AA2	D	78	82	Right-handed 310
Helix 3	AA3	D	134	140	Right-handed 310
Helix 4	AA4	D	200	210	Right-handed alpha
Helix 5	AA5	G	61	66	Right-handed alpha
Helix 6	AA6	G	78	82	Right-handed 310
Helix 7	AA7	G	134	140	Right-handed 310
Helix 8	AA8	G	200	210	Right-handed alpha
Helix 9	AA9	J	61	65	Right-handed 310
Helix 10	AB1	J	78	82	Right-handed 310
Helix 11	AB2	J	134	140	Right-handed 310
Helix 12	AB3	J	200	210	Right-handed alpha

There are 6 sheets in PDB entry 6H6A. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	101	106	first strand
Strand 2	D	87	95	anti-parallel
Strand 3	D	142	151	anti-parallel
Strand 4	D	186	195	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	128	132	first strand
Strand 2	D	225	235	parallel
Strand 3	D	214	222	anti-parallel
Strand 4	D	159	167	anti-parallel
Strand 5	D	170	178	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	101	106	first strand
Strand 2	G	87	95	anti-parallel
Strand 3	G	142	151	anti-parallel
Strand 4	G	186	195	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	128	132	first strand
Strand 2	G	225	235	parallel
Strand 3	G	214	222	anti-parallel
Strand 4	G	156	167	anti-parallel
Strand 5	G	170	182	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	101	106	first strand
Strand 2	J	87	95	anti-parallel
Strand 3	J	142	151	anti-parallel
Strand 4	J	186	195	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	128	132	first strand
Strand 2	J	225	235	parallel
Strand 3	J	214	222	anti-parallel
Strand 4	J	159	167	anti-parallel
Strand 5	J	170	178	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6H6A

Analysis of interatomic Contacts of Structural Units in PDB entry:
6H6A