Analysis of interatomic Contacts of Structural Units in PDB entry:
6H6K

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6H6K entry

There are 5 chains in PDB entry 6H6K (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 2	ILE 415
B	ALA 2	ILE 415
C	ALA 2	ILE 415
D	ALA 2	ILE 415
E	ALA 2	ILE 415

There are 46 helices in PDB entry 6H6K. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	21	31	Right-handed alpha
Helix 2	AA2	A	74	78	Right-handed 310
Helix 3	AA3	A	97	99	Right-handed 310
Helix 4	AA4	A	100	109	Right-handed alpha
Helix 5	AA5	A	126	140	Right-handed alpha
Helix 6	AA6	A	155	171	Right-handed alpha
Helix 7	AA7	A	190	202	Right-handed alpha
Helix 8	AA8	A	219	221	Right-handed 310
Helix 9	AA9	A	302	307	Right-handed alpha
Helix 10	AB1	B	21	31	Right-handed alpha
Helix 11	AB2	B	74	78	Right-handed 310
Helix 12	AB3	B	97	99	Right-handed 310
Helix 13	AB4	B	100	109	Right-handed alpha
Helix 14	AB5	B	126	140	Right-handed alpha
Helix 15	AB6	B	150	154	Right-handed 310
Helix 16	AB7	B	155	171	Right-handed alpha
Helix 17	AB8	B	190	202	Right-handed alpha
Helix 18	AB9	B	219	221	Right-handed 310
Helix 19	AC1	B	302	307	Right-handed alpha
Helix 20	AC2	C	21	31	Right-handed alpha
Helix 21	AC3	C	74	78	Right-handed 310
Helix 22	AC4	C	97	99	Right-handed 310
Helix 23	AC5	C	100	109	Right-handed alpha
Helix 24	AC6	C	126	140	Right-handed alpha
Helix 25	AC7	C	150	154	Right-handed 310
Helix 26	AC8	C	155	171	Right-handed alpha
Helix 27	AC9	C	190	202	Right-handed alpha
Helix 28	AD1	C	219	221	Right-handed 310
Helix 29	AD2	C	302	307	Right-handed alpha
Helix 30	AD3	D	21	31	Right-handed alpha
Helix 31	AD4	D	97	99	Right-handed 310
Helix 32	AD5	D	100	109	Right-handed alpha
Helix 33	AD6	D	126	140	Right-handed alpha
Helix 34	AD7	D	150	154	Right-handed 310
Helix 35	AD8	D	155	170	Right-handed alpha
Helix 36	AD9	D	190	202	Right-handed alpha
Helix 37	AE1	D	219	221	Right-handed 310
Helix 38	AE2	D	302	307	Right-handed alpha
Helix 39	AE3	E	21	31	Right-handed alpha
Helix 40	AE4	E	74	78	Right-handed 310
Helix 41	AE5	E	100	109	Right-handed alpha
Helix 42	AE6	E	126	140	Right-handed alpha
Helix 43	AE7	E	155	170	Right-handed alpha
Helix 44	AE8	E	190	202	Right-handed alpha
Helix 45	AE9	E	229	233	Right-handed 310
Helix 46	AF1	E	302	306	Right-handed 310

There are 26 sheets in PDB entry 6H6K. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	68	69	first strand
Strand 2	A	49	58	anti-parallel
Strand 3	A	84	93	anti-parallel
Strand 4	A	11	16	parallel
Strand 5	A	113	119	parallel
Strand 6	A	144	149	parallel
Strand 7	A	180	182	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	68	69	first strand
Strand 2	A	49	58	anti-parallel
Strand 3	A	223	224	parallel

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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	284	286	first strand
Strand 2	A	266	281	anti-parallel
Strand 3	A	295	299	anti-parallel
Strand 4	A	237	244	anti-parallel
Strand 5	A	214	217	anti-parallel
Strand 6	A	311	318	anti-parallel
Strand 7	A	252	263	anti-parallel
Strand 8	A	266	281	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	247	248	first strand
Strand 2	A	288	289	anti-parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	325	335	first strand
Strand 2	A	377	387	anti-parallel
Strand 3	A	364	373	anti-parallel
Strand 4	A	356	361	anti-parallel
Strand 5	A	393	401	anti-parallel
Strand 6	A	404	414	anti-parallel
Strand 7	A	325	335	anti-parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	68	69	first strand
Strand 2	B	49	58	anti-parallel
Strand 3	B	84	93	anti-parallel
Strand 4	B	11	15	parallel
Strand 5	B	113	119	parallel
Strand 6	B	144	149	parallel
Strand 7	B	180	182	parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	68	69	first strand
Strand 2	B	49	58	anti-parallel
Strand 3	B	223	224	parallel

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There are 8 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	266	275	first strand
Strand 2	B	252	263	anti-parallel
Strand 3	B	311	318	anti-parallel
Strand 4	B	214	217	anti-parallel
Strand 5	B	237	244	anti-parallel
Strand 6	B	295	298	anti-parallel
Strand 7	B	278	281	anti-parallel
Strand 8	B	284	286	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	247	248	first strand
Strand 2	B	288	289	anti-parallel

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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	325	335	first strand
Strand 2	B	377	387	anti-parallel
Strand 3	B	364	374	anti-parallel
Strand 4	B	356	361	anti-parallel
Strand 5	B	393	401	anti-parallel
Strand 6	B	404	414	anti-parallel
Strand 7	B	325	335	anti-parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	68	69	first strand
Strand 2	C	49	58	anti-parallel
Strand 3	C	84	93	anti-parallel
Strand 4	C	11	16	parallel
Strand 5	C	113	119	parallel
Strand 6	C	144	149	parallel
Strand 7	C	180	182	parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	68	69	first strand
Strand 2	C	49	58	anti-parallel
Strand 3	C	223	224	parallel

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There are 8 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	284	286	first strand
Strand 2	C	266	281	anti-parallel
Strand 3	C	295	299	anti-parallel
Strand 4	C	237	244	anti-parallel
Strand 5	C	214	217	anti-parallel
Strand 6	C	311	318	anti-parallel
Strand 7	C	252	263	anti-parallel
Strand 8	C	266	281	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	247	248	first strand
Strand 2	C	288	289	anti-parallel

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There are 7 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	325	335	first strand
Strand 2	C	377	387	anti-parallel
Strand 3	C	364	373	anti-parallel
Strand 4	C	356	361	anti-parallel
Strand 5	C	393	401	anti-parallel
Strand 6	C	404	414	anti-parallel
Strand 7	C	325	335	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	338	339	first strand
Strand 2	C	346	347	anti-parallel

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There are 7 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	68	69	first strand
Strand 2	D	49	58	anti-parallel
Strand 3	D	84	93	anti-parallel
Strand 4	D	10	16	parallel
Strand 5	D	113	119	parallel
Strand 6	D	144	149	parallel
Strand 7	D	180	182	parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	68	69	first strand
Strand 2	D	49	58	anti-parallel
Strand 3	D	223	224	parallel

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There are 8 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	284	286	first strand
Strand 2	D	266	281	anti-parallel
Strand 3	D	295	299	anti-parallel
Strand 4	D	237	244	anti-parallel
Strand 5	D	214	217	anti-parallel
Strand 6	D	311	318	anti-parallel
Strand 7	D	252	263	anti-parallel
Strand 8	D	266	281	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	247	248	first strand
Strand 2	D	288	289	anti-parallel

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There are 7 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	325	335	first strand
Strand 2	D	377	387	anti-parallel
Strand 3	D	364	373	anti-parallel
Strand 4	D	356	361	anti-parallel
Strand 5	D	393	401	anti-parallel
Strand 6	D	404	414	anti-parallel
Strand 7	D	325	335	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	338	339	first strand
Strand 2	D	346	347	anti-parallel

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There are 7 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	68	69	first strand
Strand 2	E	50	58	anti-parallel
Strand 3	E	84	93	anti-parallel
Strand 4	E	11	16	parallel
Strand 5	E	113	119	parallel
Strand 6	E	144	149	parallel
Strand 7	E	180	182	parallel

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There are 8 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	284	286	first strand
Strand 2	E	266	281	anti-parallel
Strand 3	E	295	299	anti-parallel
Strand 4	E	237	244	anti-parallel
Strand 5	E	214	221	anti-parallel
Strand 6	E	315	318	anti-parallel
Strand 7	E	252	263	anti-parallel
Strand 8	E	266	281	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	247	248	first strand
Strand 2	E	288	289	anti-parallel

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There are 7 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	325	335	first strand
Strand 2	E	378	387	anti-parallel
Strand 3	E	364	373	anti-parallel
Strand 4	E	356	361	anti-parallel
Strand 5	E	393	400	anti-parallel
Strand 6	E	405	413	anti-parallel
Strand 7	E	325	335	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6H6K

Analysis of interatomic Contacts of Structural Units in PDB entry:
6H6K