Analysis of interatomic Contacts of Structural Units in PDB entry:
6H6W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6H6W entry

There are 2 chains in PDB entry 6H6W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 ASN 3SER 270
A
 ARG 33ALA 276
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 6H6W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
4 15Right-handed alpha
Helix 2
AA2
B
19 28Right-handed alpha
Helix 3
AA3
B
48 51Right-handed 310
Helix 4
AA4
B
52 67Right-handed alpha
Helix 5
AA5
B
79 92Right-handed alpha
Helix 6
AA6
B
95 119Right-handed alpha
Helix 7
AA7
B
120 122Right-handed 310
Helix 8
AA8
B
133 142Right-handed alpha
Helix 9
AA9
B
152 156Right-handed 310
Helix 10
AB1
B
168 181Right-handed alpha
Helix 11
AB2
B
213 219Right-handed alpha
Helix 12
AB3
B
227 237Right-handed alpha
Helix 13
AB4
B
252 259Right-handed alpha
Helix 14
AB5
A
47 52Right-handed alpha
Helix 15
AB6
A
54 69Right-handed alpha
Helix 16
AB7
A
81 94Right-handed alpha
Helix 17
AB8
A
97 120Right-handed alpha
Helix 18
AB9
A
121 124Right-handed 310
Helix 19
AC1
A
129 144Right-handed alpha
Helix 20
AC2
A
155 159Right-handed 310
Helix 21
AC3
A
169 182Right-handed alpha
Helix 22
AC4
A
204 208Right-handed 310
Helix 23
AC5
A
216 222Right-handed alpha
Helix 24
AC6
A
229 238Right-handed alpha
Helix 25
AC7
A
254 261Right-handed alpha
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There are 4 sheets in PDB entry 6H6W. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
143 147first strand
Strand 2
B
71 76parallel
Strand 3
B
38 43parallel
Strand 4
B
184 189parallel
Strand 5
B
242 247parallel
Strand 6
B
265 268anti-parallel
Strand 7
B
210 212parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
194 195first strand
Strand 2
B
207 208anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
146 150first strand
Strand 2
A
73 78parallel
Strand 3
A
41 46parallel
Strand 4
A
185 190parallel
Strand 5
A
244 249parallel
Strand 6
A
267 270anti-parallel
Strand 7
A
213 215parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
195 196first strand
Strand 2
A
210 211anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il