Analysis of interatomic Contacts of Structural Units in PDB entry:
6H7E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6H7E entry

There are 2 chains in PDB entry 6H7E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 50LYS 305
B
 SER 51ILE 304
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 6H7E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
51 70Right-handed alpha
Helix 2
AA2
A
90 101Right-handed alpha
Helix 3
AA3
A
106 120Right-handed alpha
Helix 4
AA4
A
158 181Right-handed alpha
Helix 5
AA5
A
187 199Right-handed alpha
Helix 6
AA6
A
200 205Right-handed 310
Helix 7
AA7
A
208 219Right-handed alpha
Helix 8
AA8
A
269 276Right-handed alpha
Helix 9
AA9
A
297 305Right-handed alpha
Helix 10
AB1
B
52 70Right-handed alpha
Helix 11
AB2
B
90 99Right-handed alpha
Helix 12
AB3
B
106 120Right-handed alpha
Helix 13
AB4
B
155 181Right-handed alpha
Helix 14
AB5
B
187 199Right-handed alpha
Helix 15
AB6
B
200 205Right-handed 310
Helix 16
AB7
B
208 219Right-handed alpha
Helix 17
AB8
B
269 276Right-handed alpha
Helix 18
AB9
B
297 304Right-handed alpha
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There are 6 sheets in PDB entry 6H7E. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
75 79first strand
Strand 2
A
82 89anti-parallel
Strand 3
A
139 141anti-parallel
Strand 4
A
124 125anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
220 223first strand
Strand 2
A
291 296anti-parallel
Strand 3
A
240 246anti-parallel
Strand 4
A
267 268anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
230 232first strand
Strand 2
A
282 285anti-parallel
Strand 3
A
248 253anti-parallel
Strand 4
A
257 263anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
75 79first strand
Strand 2
B
82 89anti-parallel
Strand 3
B
139 141anti-parallel
Strand 4
B
124 125anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
220 223first strand
Strand 2
B
291 296anti-parallel
Strand 3
B
240 246anti-parallel
Strand 4
B
267 268anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
230 232first strand
Strand 2
B
282 285anti-parallel
Strand 3
B
249 253anti-parallel
Strand 4
B
257 262anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il