Analysis of interatomic Contacts of Structural Units in PDB entry:
6H7G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6H7G entry

There are 2 chains in PDB entry 6H7G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS -1LYS 338
B
 ASP 3LYS 338
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 6H7G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 30Right-handed alpha
Helix 2
AA2
A
57 60Right-handed 310
Helix 3
AA3
A
64 69Right-handed alpha
Helix 4
AA4
A
76 80Right-handed 310
Helix 5
AA5
A
81 94Right-handed alpha
Helix 6
AA6
A
132 139Right-handed alpha
Helix 7
AA7
A
148 160Right-handed alpha
Helix 8
AA8
A
178 186Right-handed alpha
Helix 9
AA9
A
187 193Right-handed 310
Helix 10
AB1
A
279 281Right-handed 310
Helix 11
AB2
A
282 288Right-handed alpha
Helix 12
AB3
A
299 308Right-handed alpha
Helix 13
AB4
A
316 338Right-handed alpha
Helix 14
AB5
B
17 29Right-handed alpha
Helix 15
AB6
B
57 60Right-handed 310
Helix 16
AB7
B
63 70Right-handed alpha
Helix 17
AB8
B
76 80Right-handed 310
Helix 18
AB9
B
81 94Right-handed alpha
Helix 19
AC1
B
132 137Right-handed alpha
Helix 20
AC2
B
148 160Right-handed alpha
Helix 21
AC3
B
173 186Right-handed alpha
Helix 22
AC4
B
187 193Right-handed 310
Helix 23
AC5
B
282 290Right-handed alpha
Helix 24
AC6
B
299 308Right-handed alpha
Helix 25
AC7
B
316 337Right-handed alpha
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There are 5 sheets in PDB entry 6H7G. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 20 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 47first strand
Strand 2
A
51 55anti-parallel
Strand 3
A
121 126parallel
Strand 4
A
6 11parallel
Strand 5
A
141 147parallel
Strand 6
A
195 201parallel
Strand 7
A
213 220anti-parallel
Strand 8
A
266 275anti-parallel
Strand 9
A
254 263anti-parallel
Strand 10
A
237 241anti-parallel
Strand 11
B
237 241anti-parallel
Strand 12
B
254 263anti-parallel
Strand 13
B
266 275anti-parallel
Strand 14
B
213 220anti-parallel
Strand 15
B
195 201anti-parallel
Strand 16
B
141 147parallel
Strand 17
B
6 11parallel
Strand 18
B
121 126parallel
Strand 19
B
51 55parallel
Strand 20
B
46 47anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
98 103first strand
Strand 2
A
110 116anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
230 231first strand
Strand 2
A
290 291anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
98 99first strand
Strand 2
B
115 116anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
102 103first strand
Strand 2
B
110 111anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il