Analysis of interatomic Contacts of Structural Units in PDB entry:
6H7U


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6H7U entry

There is 1 chain in PDB entry 6H7U (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLN 9LYS 495
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 6H7U. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
10 14Right-handed 310
Helix 2
AA2
A
24 53Right-handed alpha
Helix 3
AA3
A
63 81Right-handed alpha
Helix 4
AA4
A
81 92Right-handed alpha
Helix 5
AA5
A
93 115Right-handed alpha
Helix 6
AA6
A
117 147Right-handed alpha
Helix 7
AA7
A
154 183Right-handed alpha
Helix 8
AA8
A
185 207Right-handed alpha
Helix 9
AA9
A
224 252Right-handed alpha
Helix 10
AB1
A
256 282Right-handed alpha
Helix 11
AB2
A
286 311Right-handed alpha
Helix 12
AB3
A
312 314Right-handed 310
Helix 13
AB4
A
316 325Right-handed alpha
Helix 14
AB5
A
339 344Right-handed 310
Helix 15
AB6
A
345 366Right-handed alpha
Helix 16
AB7
A
367 369Right-handed 310
Helix 17
AB8
A
371 398Right-handed alpha
Helix 18
AB9
A
404 432Right-handed alpha
Helix 19
AC1
A
437 460Right-handed alpha
Helix 20
AC2
A
462 467Right-handed alpha
Helix 21
AC3
A
467 488Right-handed alpha
Helix 22
AC4
A
489 494Right-handed alpha
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There are 2 sheets in PDB entry 6H7U. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
18 19first strand
Strand 2
A
22 23anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
328 331first strand
Strand 2
A
334 337anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il