Analysis of interatomic Contacts of Structural Units in PDB entry:
6H7V

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6H7V entry

There are 2 chains in PDB entry 6H7V (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 32	PHE 703
B	ASP 33	ASN 669

There are 23 helices in PDB entry 6H7V. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	47	49	Right-handed 310
Helix 2	AA2	A	55	57	Right-handed 310
Helix 3	AA3	A	66	73	Right-handed alpha
Helix 4	AA4	A	76	82	Right-handed alpha
Helix 5	AA5	A	109	112	Right-handed 310
Helix 6	AA6	A	128	130	Right-handed 310
Helix 7	AA7	A	142	147	Right-handed alpha
Helix 8	AA8	A	588	592	Right-handed 310
Helix 9	AA9	B	47	49	Right-handed 310
Helix 10	AB1	B	55	57	Right-handed 310
Helix 11	AB2	B	66	73	Right-handed alpha
Helix 12	AB3	B	76	82	Right-handed alpha
Helix 13	AB4	B	109	112	Right-handed 310
Helix 14	AB5	B	128	130	Right-handed 310
Helix 15	AB6	B	142	147	Right-handed alpha
Helix 16	AB7	B	588	592	Right-handed 310
Helix 17	AB8	C	47	49	Right-handed 310
Helix 18	AB9	C	55	57	Right-handed 310
Helix 19	AC1	C	66	73	Right-handed alpha
Helix 20	AC2	C	76	82	Right-handed alpha
Helix 21	AC3	C	109	112	Right-handed 310
Helix 22	AC4	C	142	147	Right-handed alpha
Helix 23	AC5	C	588	592	Right-handed 310

There are 19 sheets in PDB entry 6H7V. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	43	45	first strand
Strand 2	A	51	53	anti-parallel

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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	61	65	first strand
Strand 2	A	134	139	anti-parallel
Strand 3	A	156	161	anti-parallel

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There are 25 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	187	193	first strand
Strand 2	A	199	205	anti-parallel
Strand 3	A	218	231	anti-parallel
Strand 4	A	236	249	anti-parallel
Strand 5	A	279	287	anti-parallel
Strand 6	A	302	322	anti-parallel
Strand 7	A	329	355	anti-parallel
Strand 8	A	358	378	anti-parallel
Strand 9	A	409	428	anti-parallel
Strand 10	A	433	448	anti-parallel
Strand 11	A	458	470	anti-parallel
Strand 12	A	475	486	anti-parallel
Strand 13	A	505	517	anti-parallel
Strand 14	A	521	534	anti-parallel
Strand 15	A	553	566	anti-parallel
Strand 16	A	577	587	anti-parallel
Strand 17	A	604	616	anti-parallel
Strand 18	A	619	630	anti-parallel
Strand 19	A	646	659	anti-parallel
Strand 20	A	662	670	anti-parallel
Strand 21	A	698	702	anti-parallel
Strand 22	A	170	176	anti-parallel
Strand 23	A	181	190	anti-parallel
Strand 24	A	208	211	anti-parallel
Strand 25	A	218	221	anti-parallel

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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	235	238	first strand
Strand 2	A	290	293	anti-parallel
Strand 3	A	302	304	anti-parallel

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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	328	331	first strand
Strand 2	A	388	391	anti-parallel

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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	536	543	first strand
Strand 2	A	546	550	anti-parallel

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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	43	45	first strand
Strand 2	B	51	53	anti-parallel

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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	61	65	first strand
Strand 2	B	134	139	anti-parallel
Strand 3	B	156	161	anti-parallel

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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	88	90	first strand
Strand 2	B	101	103	anti-parallel

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There are 25 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	187	193	first strand
Strand 2	B	199	205	anti-parallel
Strand 3	B	218	231	anti-parallel
Strand 4	B	236	249	anti-parallel
Strand 5	B	279	287	anti-parallel
Strand 6	B	302	322	anti-parallel
Strand 7	B	329	355	anti-parallel
Strand 8	B	358	378	anti-parallel
Strand 9	B	409	428	anti-parallel
Strand 10	B	433	448	anti-parallel
Strand 11	B	458	470	anti-parallel
Strand 12	B	475	486	anti-parallel
Strand 13	B	505	517	anti-parallel
Strand 14	B	521	534	anti-parallel
Strand 15	B	553	566	anti-parallel
Strand 16	B	577	587	anti-parallel
Strand 17	B	604	616	anti-parallel
Strand 18	B	619	630	anti-parallel
Strand 19	B	646	659	anti-parallel
Strand 20	B	662	670	anti-parallel
Strand 21	B	698	702	anti-parallel
Strand 22	B	170	176	anti-parallel
Strand 23	B	181	190	anti-parallel
Strand 24	B	208	211	anti-parallel
Strand 25	B	218	221	anti-parallel

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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	235	238	first strand
Strand 2	B	290	293	anti-parallel
Strand 3	B	302	304	anti-parallel

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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	328	331	first strand
Strand 2	B	388	391	anti-parallel

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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	536	538	first strand
Strand 2	B	548	550	anti-parallel

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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	43	45	first strand
Strand 2	C	51	53	anti-parallel

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There are 3 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	61	65	first strand
Strand 2	C	134	139	anti-parallel
Strand 3	C	156	161	anti-parallel

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There are 25 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	187	193	first strand
Strand 2	C	199	205	anti-parallel
Strand 3	C	218	231	anti-parallel
Strand 4	C	236	249	anti-parallel
Strand 5	C	279	287	anti-parallel
Strand 6	C	302	322	anti-parallel
Strand 7	C	329	355	anti-parallel
Strand 8	C	358	378	anti-parallel
Strand 9	C	409	428	anti-parallel
Strand 10	C	433	448	anti-parallel
Strand 11	C	458	470	anti-parallel
Strand 12	C	475	486	anti-parallel
Strand 13	C	505	517	anti-parallel
Strand 14	C	521	534	anti-parallel
Strand 15	C	553	566	anti-parallel
Strand 16	C	577	587	anti-parallel
Strand 17	C	604	616	anti-parallel
Strand 18	C	619	630	anti-parallel
Strand 19	C	646	659	anti-parallel
Strand 20	C	662	670	anti-parallel
Strand 21	C	698	702	anti-parallel
Strand 22	C	170	176	anti-parallel
Strand 23	C	181	190	anti-parallel
Strand 24	C	208	211	anti-parallel
Strand 25	C	218	221	anti-parallel

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There are 3 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	235	238	first strand
Strand 2	C	290	293	anti-parallel
Strand 3	C	302	304	anti-parallel

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There are 2 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	328	331	first strand
Strand 2	C	388	391	anti-parallel

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There are 2 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	536	543	first strand
Strand 2	C	546	550	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6H7V

Analysis of interatomic Contacts of Structural Units in PDB entry:
6H7V