Analysis of interatomic Contacts of Structural Units in PDB entry:
6H8R


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6H8R entry

There is 1 chain in PDB entry 6H8R (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN -7GLN 562
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 6H8R. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
286 295Right-handed alpha
Helix 2
AA2
A
296 305Right-handed alpha
Helix 3
AA3
A
313 317Right-handed 310
Helix 4
AA4
A
321 326Right-handed 310
Helix 5
AA5
A
334 338Right-handed 310
Helix 6
AA6
A
348 353Right-handed alpha
Helix 7
AA7
A
361 365Right-handed 310
Helix 8
AA8
A
376 378Right-handed 310
Helix 9
AA9
A
379 391Right-handed alpha
Helix 10
AB1
A
464 466Right-handed 310
Helix 11
AB2
A
467 484Right-handed alpha
Helix 12
AB3
A
500 520Right-handed alpha
Helix 13
AB4
A
523 535Right-handed alpha
Helix 14
AB5
A
541 560Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6H8R.

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
356 359first strand
Strand 2
A
369 372anti-parallel
Strand 3
A
492 495parallel
Strand 4
A
394 398parallel
Strand 5
A
447 456parallel
Strand 6
A
435 444anti-parallel
Strand 7
A
422 431anti-parallel
Strand 8
A
416 419anti-parallel
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