Analysis of interatomic Contacts of Structural Units in PDB entry:
6H9A


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6H9A entry

There is 1 chain in PDB entry 6H9A (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY -3PRO 456
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 6H9A. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
37 45Right-handed alpha
Helix 2
AA2
A
57 63Right-handed alpha
Helix 3
AA3
A
82 88Right-handed 310
Helix 4
AA4
A
90 98Right-handed alpha
Helix 5
AA5
A
112 115Right-handed 310
Helix 6
AA6
A
116 125Right-handed alpha
Helix 7
AA7
A
139 144Right-handed alpha
Helix 8
AA8
A
154 156Right-handed 310
Helix 9
AA9
A
160 169Right-handed alpha
Helix 10
AB1
A
191 196Right-handed alpha
Helix 11
AB2
A
208 210Right-handed 310
Helix 12
AB3
A
220 231Right-handed alpha
Helix 13
AB4
A
254 258Right-handed 310
Helix 14
AB5
A
259 275Right-handed alpha
Helix 15
AB6
A
285 292Right-handed alpha
Helix 16
AB7
A
316 318Right-handed 310
Helix 17
AB8
A
322 332Right-handed alpha
Helix 18
AB9
A
342 347Right-handed alpha
Helix 19
AC1
A
377 381Right-handed 310
Helix 20
AC2
A
389 400Right-handed alpha
Helix 21
AC3
A
415 428Right-handed alpha
Helix 22
AC4
A
438 445Right-handed alpha
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There are 4 sheets in PDB entry 6H9A. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
-1 36first strand
Strand 2
A
131 134parallel
Strand 3
A
105 109parallel
Strand 4
A
50 54parallel
Strand 5
A
79 80parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
74 75first strand
Strand 2
A
149 150anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
158 159first strand
Strand 2
A
278 282parallel
Strand 3
A
238 243parallel
Strand 4
A
181 187parallel
Strand 5
A
203 206parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
320 321first strand
Strand 2
A
433 436parallel
Strand 3
A
407 411parallel
Strand 4
A
335 339parallel
Strand 5
A
366 367parallel
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