Analysis of interatomic Contacts of Structural Units in PDB entry:
6H9F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6H9F entry

There are 4 chains in PDB entry 6H9F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 137
B
 MET 1GLU 483
C
 MET 1GLU 137
D
 MET 1GLU 483
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 6H9F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 30Right-handed alpha
Helix 2
AA2
A
42 54Right-handed alpha
Helix 3
AA3
A
66 71Right-handed alpha
Helix 4
AA4
A
73 81Right-handed alpha
Helix 5
AA5
A
100 111Right-handed alpha
Helix 6
AA6
A
122 134Right-handed alpha
Helix 7
AA7
B
9 21Right-handed alpha
Helix 8
AA8
B
22 30Right-handed 310
Helix 9
AA9
B
31 42Right-handed alpha
Helix 10
AB1
B
43 46Right-handed 310
Helix 11
AB2
B
47 59Right-handed alpha
Helix 12
AB3
B
71 85Right-handed alpha
Helix 13
AB4
B
96 101Right-handed alpha
Helix 14
AB5
B
103 118Right-handed alpha
Helix 15
AB6
B
126 142Right-handed alpha
Helix 16
AB7
B
155 165Right-handed alpha
Helix 17
AB8
B
186 207Right-handed alpha
Helix 18
AB9
B
225 243Right-handed alpha
Helix 19
AC1
B
257 279Right-handed alpha
Helix 20
AC2
B
300 319Right-handed alpha
Helix 21
AC3
B
336 354Right-handed alpha
Helix 22
AC4
B
362 387Right-handed alpha
Helix 23
AC5
B
390 401Right-handed alpha
Helix 24
AC6
B
439 458Right-handed alpha
Helix 25
AC7
B
462 473Right-handed alpha
Helix 26
AC8
B
474 476Right-handed 310
Helix 27
AC9
C
17 30Right-handed alpha
Helix 28
AD1
C
42 54Right-handed alpha
Helix 29
AD2
C
66 71Right-handed alpha
Helix 30
AD3
C
73 81Right-handed alpha
Helix 31
AD4
C
100 110Right-handed alpha
Helix 32
AD5
C
122 134Right-handed alpha
Helix 33
AD6
D
9 21Right-handed alpha
Helix 34
AD7
D
22 23Right-handed 310
Helix 35
AD8
D
24 30Right-handed 310
Helix 36
AD9
D
31 41Right-handed alpha
Helix 37
AE1
D
42 46Right-handed 310
Helix 38
AE2
D
47 59Right-handed alpha
Helix 39
AE3
D
71 85Right-handed alpha
Helix 40
AE4
D
96 101Right-handed alpha
Helix 41
AE5
D
103 118Right-handed alpha
Helix 42
AE6
D
126 142Right-handed alpha
Helix 43
AE7
D
155 165Right-handed alpha
Helix 44
AE8
D
186 207Right-handed alpha
Helix 45
AE9
D
225 243Right-handed alpha
Helix 46
AF1
D
257 279Right-handed alpha
Helix 47
AF2
D
300 319Right-handed alpha
Helix 48
AF3
D
336 354Right-handed alpha
Helix 49
AF4
D
362 387Right-handed alpha
Helix 50
AF5
D
390 401Right-handed alpha
Helix 51
AF6
D
439 458Right-handed alpha
Helix 52
AF7
D
462 473Right-handed alpha
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There are 6 sheets in PDB entry 6H9F. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 41first strand
Strand 2
A
5 11parallel
Strand 3
A
57 62parallel
Strand 4
A
87 92parallel
Strand 5
A
115 116parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
62 64first strand
Strand 2
B
322 324parallel
Strand 3
B
285 291parallel
Strand 4
B
247 253parallel
Strand 5
B
212 214parallel
Strand 6
B
169 171parallel
Strand 7
B
146 149parallel
Strand 8
B
91 94parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
419 422first strand
Strand 2
B
428 432anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
33 41first strand
Strand 2
C
5 11parallel
Strand 3
C
57 62parallel
Strand 4
C
87 92parallel
Strand 5
C
115 116parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
62 64first strand
Strand 2
D
322 324parallel
Strand 3
D
285 291parallel
Strand 4
D
247 253parallel
Strand 5
D
212 214parallel
Strand 6
D
169 171parallel
Strand 7
D
146 149parallel
Strand 8
D
91 94parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
419 422first strand
Strand 2
D
428 432anti-parallel
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