Analysis of interatomic Contacts of Structural Units in PDB entry:
6HA0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6HA0 entry

There are 2 chains in PDB entry 6HA0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 225LEU 386
B
 MET 227LEU 386
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 6HA0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
374 385Right-handed alpha
Helix 2
AA2
B
374 385Right-handed alpha
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There are 6 sheets in PDB entry 6HA0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 11 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
229 232first strand
Strand 2
A
367 371anti-parallel
Strand 3
A
243 248anti-parallel
Strand 4
A
326 332anti-parallel
Strand 5
A
335 342anti-parallel
Strand 6
A
315 322parallel
Strand 7
A
300 307anti-parallel
Strand 8
A
265 271anti-parallel
Strand 9
A
253 259anti-parallel
Strand 10
A
360 363anti-parallel
Strand 11
A
235 237anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
229 232first strand
Strand 2
A
367 371anti-parallel
Strand 3
A
243 248anti-parallel
Strand 4
A
326 332anti-parallel
Strand 5
A
335 342anti-parallel
Strand 6
A
347 351anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
275 284first strand
Strand 2
A
287 295anti-parallel
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There are 11 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
229 232first strand
Strand 2
B
366 371anti-parallel
Strand 3
B
243 248anti-parallel
Strand 4
B
326 332anti-parallel
Strand 5
B
335 342anti-parallel
Strand 6
B
315 322parallel
Strand 7
B
300 307anti-parallel
Strand 8
B
265 271anti-parallel
Strand 9
B
253 259anti-parallel
Strand 10
B
360 363anti-parallel
Strand 11
B
235 237anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
229 232first strand
Strand 2
B
366 371anti-parallel
Strand 3
B
243 248anti-parallel
Strand 4
B
326 332anti-parallel
Strand 5
B
335 342anti-parallel
Strand 6
B
347 351anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
275 284first strand
Strand 2
B
287 295anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il