Analysis of interatomic Contacts of Structural Units in PDB entry:
6HA7

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6HA7 entry

There are 4 chains in PDB entry 6HA7 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 27	SER 406
C	ARG 23	LEU 179
B	SER 27	GLY 407
D	LEU 22	ARG 176

There are 50 helices in PDB entry 6HA7. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	77	83	Right-handed alpha
Helix 2	AA2	A	94	98	Right-handed 310
Helix 3	AA3	A	105	112	Right-handed alpha
Helix 4	AA4	A	141	162	Right-handed alpha
Helix 5	AA5	A	177	191	Right-handed alpha
Helix 6	AA6	A	201	209	Right-handed alpha
Helix 7	AA7	A	210	214	Right-handed 310
Helix 8	AA8	A	254	274	Right-handed alpha
Helix 9	AA9	A	281	299	Right-handed alpha
Helix 10	AB1	A	324	338	Right-handed alpha
Helix 11	AB2	A	338	349	Right-handed alpha
Helix 12	AB3	A	352	356	Right-handed 310
Helix 13	AB4	A	363	367	Right-handed 310
Helix 14	AB5	A	368	379	Right-handed alpha
Helix 15	AB6	A	392	406	Right-handed alpha
Helix 16	AB7	C	27	44	Right-handed alpha
Helix 17	AB8	C	49	63	Right-handed alpha
Helix 18	AB9	C	66	75	Right-handed alpha
Helix 19	AC1	C	86	95	Right-handed alpha
Helix 20	AC2	C	98	110	Right-handed alpha
Helix 21	AC3	C	111	116	Right-handed alpha
Helix 22	AC4	C	128	132	Right-handed 310
Helix 23	AC5	C	133	145	Right-handed alpha
Helix 24	AC6	C	153	169	Right-handed alpha
Helix 25	AC7	C	169	176	Right-handed alpha
Helix 26	AC8	B	77	83	Right-handed alpha
Helix 27	AC9	B	94	98	Right-handed 310
Helix 28	AD1	B	105	112	Right-handed alpha
Helix 29	AD2	B	141	162	Right-handed alpha
Helix 30	AD3	B	177	191	Right-handed alpha
Helix 31	AD4	B	201	209	Right-handed alpha
Helix 32	AD5	B	210	214	Right-handed 310
Helix 33	AD6	B	254	274	Right-handed alpha
Helix 34	AD7	B	281	299	Right-handed alpha
Helix 35	AD8	B	324	338	Right-handed alpha
Helix 36	AD9	B	338	349	Right-handed alpha
Helix 37	AE1	B	352	356	Right-handed 310
Helix 38	AE2	B	363	367	Right-handed 310
Helix 39	AE3	B	368	379	Right-handed alpha
Helix 40	AE4	B	392	406	Right-handed alpha
Helix 41	AE5	D	27	44	Right-handed alpha
Helix 42	AE6	D	49	63	Right-handed alpha
Helix 43	AE7	D	66	75	Right-handed alpha
Helix 44	AE8	D	86	95	Right-handed alpha
Helix 45	AE9	D	98	110	Right-handed alpha
Helix 46	AF1	D	111	116	Right-handed alpha
Helix 47	AF2	D	128	132	Right-handed 310
Helix 48	AF3	D	133	145	Right-handed alpha
Helix 49	AF4	D	153	169	Right-handed alpha
Helix 50	AF5	D	169	175	Right-handed alpha

There are 12 sheets in PDB entry 6HA7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	50	52	first strand
Strand 2	A	39	45	anti-parallel
Strand 3	A	61	63	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	50	52	first strand
Strand 2	A	39	45	anti-parallel
Strand 3	A	31	35	anti-parallel
Strand 4	A	167	172	parallel
Strand 5	A	194	200	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	74	76	first strand
Strand 2	A	66	68	anti-parallel
Strand 3	A	91	92	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	118	121	first strand
Strand 2	A	126	131	anti-parallel
Strand 3	A	137	140	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	241	250	first strand
Strand 2	A	230	238	anti-parallel
Strand 3	A	217	225	anti-parallel
Strand 4	A	358	362	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	304	309	first strand
Strand 2	A	318	323	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	50	52	first strand
Strand 2	B	39	45	anti-parallel
Strand 3	B	61	63	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	50	52	first strand
Strand 2	B	39	45	anti-parallel
Strand 3	B	31	35	anti-parallel
Strand 4	B	167	172	parallel
Strand 5	B	194	200	parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	74	76	first strand
Strand 2	B	66	68	anti-parallel
Strand 3	B	91	92	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	118	121	first strand
Strand 2	B	126	131	anti-parallel
Strand 3	B	137	140	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	241	250	first strand
Strand 2	B	230	238	anti-parallel
Strand 3	B	217	225	anti-parallel
Strand 4	B	358	362	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	304	309	first strand
Strand 2	B	318	323	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6HA7

Analysis of interatomic Contacts of Structural Units in PDB entry:
6HA7