Analysis of interatomic Contacts of Structural Units in PDB entry:
6HAC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6HAC entry

There is 1 chain in PDB entry 6HAC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LYS 342
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 23 helices in PDB entry 6HAC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 17Right-handed alpha
Helix 2
AA2
A
22 33Right-handed alpha
Helix 3
AA3
A
34 40Right-handed 310
Helix 4
AA4
A
41 54Right-handed alpha
Helix 5
AA5
A
65 69Right-handed 310
Helix 6
AA6
A
80 90Right-handed alpha
Helix 7
AA7
A
92 95Right-handed 310
Helix 8
AA8
A
96 111Right-handed alpha
Helix 9
AA9
A
123 128Right-handed 310
Helix 10
AB1
A
134 140Right-handed alpha
Helix 11
AB2
A
154 161Right-handed alpha
Helix 12
AB3
A
162 166Right-handed 310
Helix 13
AB4
A
179 190Right-handed alpha
Helix 14
AB5
A
220 236Right-handed alpha
Helix 15
AB6
A
245 251Right-handed alpha
Helix 16
AB7
A
253 274Right-handed alpha
Helix 17
AB8
A
278 301Right-handed alpha
Helix 18
AB9
A
304 309Right-handed alpha
Helix 19
AC1
A
310 313Right-handed 310
Helix 20
AC2
A
314 319Right-handed alpha
Helix 21
AC3
A
320 322Right-handed 310
Helix 22
AC4
A
323 327Right-handed 310
Helix 23
AC5
A
328 340Right-handed alpha
Back to top of page

There are 3 sheets in PDB entry 6HAC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
130 132first strand
Strand 2
A
59 63parallel
Strand 3
A
2 6parallel
Strand 4
A
144 147parallel
Strand 5
A
171 174parallel
Strand 6
A
196 199parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 75first strand
Strand 2
A
117 120parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
213 216first strand
Strand 2
A
239 242parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il