Analysis of interatomic Contacts of Structural Units in PDB entry:
6HAN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6HAN entry

There are 4 chains in PDB entry 6HAN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 212PRO 305
B
 GLY 211GLY 294
C
 GLY 211PRO 305
D
 GLY 211GLU 292
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 6HAN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
214 228Right-handed alpha
Helix 2
AA2
A
259 278Right-handed alpha
Helix 3
AA3
B
212 227Right-handed alpha
Helix 4
AA4
B
259 278Right-handed alpha
Helix 5
AA5
C
214 227Right-handed alpha
Helix 6
AA6
C
259 278Right-handed alpha
Helix 7
AA7
D
212 228Right-handed alpha
Helix 8
AA8
D
259 278Right-handed alpha
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There are 4 sheets in PDB entry 6HAN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
234 242first strand
Strand 2
A
245 254anti-parallel
Strand 3
A
281 290parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
234 242first strand
Strand 2
B
245 254anti-parallel
Strand 3
B
281 290parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
281 290first strand
Strand 2
C
245 254parallel
Strand 3
C
234 242anti-parallel
Strand 4
C
300 301parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
234 242first strand
Strand 2
D
245 254anti-parallel
Strand 3
D
281 290parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il