Analysis of interatomic Contacts of Structural Units in PDB entry:
6HAY

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6HAY entry

There are 8 chains in PDB entry 6HAY (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 1374	GLU 1493
B	PRO 59	ARG 210
C	MET 16	CYS 112
D	MET 1	LYS 104
E	SER 1377	GLU 1491
F	PRO 59	GLN 209
G	MET 16	CYS 112
H	MET 1	MET 103

There are 35 helices in PDB entry 6HAY. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	1380	1397	Right-handed alpha
Helix 2	AA2	A	1406	1410	Right-handed 310
Helix 3	AA3	A	1418	1425	Right-handed alpha
Helix 4	AA4	A	1430	1440	Right-handed alpha
Helix 5	AA5	A	1445	1465	Right-handed alpha
Helix 6	AA6	A	1468	1493	Right-handed alpha
Helix 7	AA7	B	157	170	Right-handed alpha
Helix 8	AA8	B	171	178	Right-handed 310
Helix 9	AA9	B	182	190	Right-handed alpha
Helix 10	AB1	B	193	209	Right-handed alpha
Helix 11	AB2	C	33	37	Right-handed alpha
Helix 12	AB3	C	39	48	Right-handed alpha
Helix 13	AB4	C	66	84	Right-handed alpha
Helix 14	AB5	C	99	111	Right-handed alpha
Helix 15	AB6	D	23	36	Right-handed alpha
Helix 16	AB7	D	38	40	Right-handed 310
Helix 17	AB8	D	56	61	Right-handed alpha
Helix 18	AB9	D	100	104	Right-handed 310
Helix 19	AC1	E	1380	1397	Right-handed alpha
Helix 20	AC2	E	1406	1410	Right-handed 310
Helix 21	AC3	E	1418	1425	Right-handed alpha
Helix 22	AC4	E	1430	1440	Right-handed alpha
Helix 23	AC5	E	1445	1465	Right-handed alpha
Helix 24	AC6	E	1468	1490	Right-handed alpha
Helix 25	AC7	F	157	170	Right-handed alpha
Helix 26	AC8	F	171	178	Right-handed 310
Helix 27	AC9	F	183	190	Right-handed alpha
Helix 28	AD1	F	193	209	Right-handed alpha
Helix 29	AD2	G	33	37	Right-handed alpha
Helix 30	AD3	G	39	47	Right-handed alpha
Helix 31	AD4	G	66	84	Right-handed alpha
Helix 32	AD5	G	96	98	Right-handed 310
Helix 33	AD6	G	99	111	Right-handed alpha
Helix 34	AD7	H	23	36	Right-handed alpha
Helix 35	AD8	H	38	40	Right-handed 310

There are 8 sheets in PDB entry 6HAY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	106	112	first strand
Strand 2	B	71	78	anti-parallel
Strand 3	B	147	152	parallel
Strand 4	B	129	130	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	95	97	first strand
Strand 2	B	84	89	anti-parallel
Strand 3	B	116	121	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	59	61	first strand
Strand 2	C	18	22	parallel
Strand 3	C	28	32	anti-parallel
Strand 4	D	12	19	parallel
Strand 5	D	2	9	anti-parallel
Strand 6	D	73	81	parallel
Strand 7	D	42	46	anti-parallel
Strand 8	D	49	50	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	59	61	first strand
Strand 2	C	18	22	parallel
Strand 3	C	28	32	anti-parallel
Strand 4	D	12	19	parallel
Strand 5	D	2	9	anti-parallel
Strand 6	D	73	81	parallel
Strand 7	D	84	85	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	106	112	first strand
Strand 2	F	71	78	anti-parallel
Strand 3	F	147	152	parallel
Strand 4	F	129	130	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	95	97	first strand
Strand 2	F	84	89	anti-parallel
Strand 3	F	116	121	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	59	61	first strand
Strand 2	G	18	22	parallel
Strand 3	G	28	32	anti-parallel
Strand 4	H	12	19	parallel
Strand 5	H	2	9	anti-parallel
Strand 6	H	73	81	parallel
Strand 7	H	42	46	anti-parallel
Strand 8	H	49	50	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	59	61	first strand
Strand 2	G	18	22	parallel
Strand 3	G	28	32	anti-parallel
Strand 4	H	12	19	parallel
Strand 5	H	2	9	anti-parallel
Strand 6	H	73	81	parallel
Strand 7	H	84	85	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6HAY

Analysis of interatomic Contacts of Structural Units in PDB entry:
6HAY