Analysis of interatomic Contacts of Structural Units in PDB entry:
6HB3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6HB3 entry

There are 4 chains in PDB entry 6HB3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 0PRO 357
B
 GLY -1GLY 358
C
 GLY -1GLU 356
D
 GLY 0LYS 176
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are116 helices in PDB entry 6HB3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
0 10Right-handed alpha
Helix 2
AA2
A
11 14Right-handed 310
Helix 3
AA3
A
16 28Right-handed alpha
Helix 4
AA4
A
29 32Right-handed 310
Helix 5
AA5
A
33 39Right-handed 310
Helix 6
AA6
A
40 56Right-handed alpha
Helix 7
AA7
A
61 76Right-handed alpha
Helix 8
AA8
A
78 88Right-handed alpha
Helix 9
AA9
A
90 101Right-handed alpha
Helix 10
AB1
A
107 119Right-handed alpha
Helix 11
AB2
A
120 130Right-handed 310
Helix 12
AB3
A
157 169Right-handed alpha
Helix 13
AB4
A
170 173Right-handed 310
Helix 14
AB5
A
182 191Right-handed alpha
Helix 15
AB6
A
193 201Right-handed alpha
Helix 16
AB7
A
210 217Right-handed alpha
Helix 17
AB8
A
218 221Right-handed 310
Helix 18
AB9
A
224 239Right-handed alpha
Helix 19
AC1
A
240 243Right-handed 310
Helix 20
AC2
A
244 251Right-handed alpha
Helix 21
AC3
A
256 262Right-handed alpha
Helix 22
AC4
A
263 265Right-handed 310
Helix 23
AC5
A
273 278Right-handed alpha
Helix 24
AC6
A
279 280Right-handed 310
Helix 25
AC7
A
281 285Right-handed 310
Helix 26
AC8
A
296 311Right-handed alpha
Helix 27
AC9
A
313 323Right-handed alpha
Helix 28
AD1
A
324 336Right-handed alpha
Helix 29
AD2
A
338 353Right-handed alpha
Helix 30
AD3
B
0 10Right-handed alpha
Helix 31
AD4
B
11 14Right-handed 310
Helix 32
AD5
B
16 28Right-handed alpha
Helix 33
AD6
B
29 32Right-handed 310
Helix 34
AD7
B
33 39Right-handed 310
Helix 35
AD8
B
40 56Right-handed alpha
Helix 36
AD9
B
61 76Right-handed alpha
Helix 37
AE1
B
78 88Right-handed alpha
Helix 38
AE2
B
90 101Right-handed alpha
Helix 39
AE3
B
107 119Right-handed alpha
Helix 40
AE4
B
120 130Right-handed 310
Helix 41
AE5
B
157 170Right-handed alpha
Helix 42
AE6
B
171 173Right-handed 310
Helix 43
AE7
B
182 191Right-handed alpha
Helix 44
AE8
B
193 201Right-handed alpha
Helix 45
AE9
B
210 217Right-handed alpha
Helix 46
AF1
B
218 221Right-handed 310
Helix 47
AF2
B
224 239Right-handed alpha
Helix 48
AF3
B
240 243Right-handed 310
Helix 49
AF4
B
244 251Right-handed alpha
Helix 50
AF5
B
256 262Right-handed alpha
Helix 51
AF6
B
263 265Right-handed 310
Helix 52
AF7
B
273 278Right-handed alpha
Helix 53
AF8
B
279 280Right-handed 310
Helix 54
AF9
B
281 285Right-handed 310
Helix 55
AG1
B
296 311Right-handed alpha
Helix 56
AG2
B
313 323Right-handed alpha
Helix 57
AG3
B
324 336Right-handed alpha
Helix 58
AG4
B
338 353Right-handed alpha
Helix 59
AG5
C
0 10Right-handed alpha
Helix 60
AG6
C
11 14Right-handed 310
Helix 61
AG7
C
16 28Right-handed alpha
Helix 62
AG8
C
29 32Right-handed 310
Helix 63
AG9
C
33 39Right-handed 310
Helix 64
AH1
C
40 56Right-handed alpha
Helix 65
AH2
C
61 76Right-handed alpha
Helix 66
AH3
C
78 88Right-handed alpha
Helix 67
AH4
C
90 101Right-handed alpha
Helix 68
AH5
C
107 119Right-handed alpha
Helix 69
AH6
C
120 130Right-handed 310
Helix 70
AH7
C
157 170Right-handed alpha
Helix 71
AH8
C
171 173Right-handed 310
Helix 72
AH9
C
182 191Right-handed alpha
Helix 73
AI1
C
193 201Right-handed alpha
Helix 74
AI2
C
210 217Right-handed alpha
Helix 75
AI3
C
218 221Right-handed 310
Helix 76
AI4
C
224 239Right-handed alpha
Helix 77
AI5
C
240 243Right-handed 310
Helix 78
AI6
C
244 251Right-handed alpha
Helix 79
AI7
C
256 262Right-handed alpha
Helix 80
AI8
C
263 265Right-handed 310
Helix 81
AI9
C
273 278Right-handed alpha
Helix 82
AJ1
C
279 280Right-handed 310
Helix 83
AJ2
C
281 285Right-handed 310
Helix 84
AJ3
C
296 311Right-handed alpha
Helix 85
AJ4
C
313 323Right-handed alpha
Helix 86
AJ5
C
324 336Right-handed alpha
Helix 87
AJ6
C
338 353Right-handed alpha
Helix 88
AJ7
D
1 10Right-handed alpha
Helix 89
AJ8
D
11 14Right-handed 310
Helix 90
AJ9
D
16 28Right-handed alpha
Helix 91
AK1
D
29 32Right-handed 310
Helix 92
AK2
D
33 39Right-handed 310
Helix 93
AK3
D
40 56Right-handed alpha
Helix 94
AK4
D
61 76Right-handed alpha
Helix 95
AK5
D
78 88Right-handed alpha
Helix 96
AK6
D
90 101Right-handed alpha
Helix 97
AK7
D
107 119Right-handed alpha
Helix 98
AK8
D
120 130Right-handed 310
Helix 99
AK9
D
157 169Right-handed alpha
Helix 100
AL1
D
170 173Right-handed 310
Helix 101
AL2
D
182 191Right-handed alpha
Helix 102
AL3
D
193 201Right-handed alpha
Helix 103
AL4
D
210 217Right-handed alpha
Helix 104
AL5
D
218 221Right-handed 310
Helix 105
AL6
D
224 239Right-handed alpha
Helix 106
AL7
D
240 243Right-handed 310
Helix 107
AL8
D
244 251Right-handed alpha
Helix 108
AL9
D
256 262Right-handed alpha
Helix 109
AM1
D
263 265Right-handed 310
Helix 110
AM2
D
273 278Right-handed alpha
Helix 111
AM3
D
279 280Right-handed 310
Helix 112
AM4
D
281 285Right-handed 310
Helix 113
AM5
D
296 311Right-handed alpha
Helix 114
AM6
D
313 323Right-handed alpha
Helix 115
AM7
D
324 336Right-handed alpha
Helix 116
AM8
D
338 353Right-handed alpha
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There are 4 sheets in PDB entry 6HB3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
138 139first strand
Strand 2
A
144 145anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
138 139first strand
Strand 2
B
144 145anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
138 139first strand
Strand 2
C
144 145anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
138 139first strand
Strand 2
D
144 145anti-parallel
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