Analysis of interatomic Contacts of Structural Units in PDB entry:
6HBE

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6HBE entry

There are 3 chains in PDB entry 6HBE (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 20	LEU 444
B	ALA 20	LEU 444
C	ALA 20	GLN 446

There are 27 helices in PDB entry 6HBE. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	86	91	Right-handed alpha
Helix 2	AA2	A	119	127	Right-handed alpha
Helix 3	AA3	A	142	149	Right-handed alpha
Helix 4	AA4	A	166	173	Right-handed alpha
Helix 5	AA5	A	185	190	Right-handed alpha
Helix 6	AA6	A	268	273	Right-handed alpha
Helix 7	AA7	A	319	322	Right-handed 310
Helix 8	AA8	A	330	335	Right-handed alpha
Helix 9	AA9	A	383	387	Right-handed 310
Helix 10	AB1	B	86	91	Right-handed alpha
Helix 11	AB2	B	119	127	Right-handed alpha
Helix 12	AB3	B	142	149	Right-handed alpha
Helix 13	AB4	B	166	173	Right-handed alpha
Helix 14	AB5	B	185	190	Right-handed alpha
Helix 15	AB6	B	268	273	Right-handed alpha
Helix 16	AB7	B	319	322	Right-handed 310
Helix 17	AB8	B	330	335	Right-handed alpha
Helix 18	AB9	B	383	387	Right-handed 310
Helix 19	AC1	C	86	91	Right-handed alpha
Helix 20	AC2	C	119	127	Right-handed alpha
Helix 21	AC3	C	142	149	Right-handed alpha
Helix 22	AC4	C	166	173	Right-handed alpha
Helix 23	AC5	C	185	190	Right-handed alpha
Helix 24	AC6	C	268	273	Right-handed alpha
Helix 25	AC7	C	319	322	Right-handed 310
Helix 26	AC8	C	330	335	Right-handed alpha
Helix 27	AC9	C	383	387	Right-handed 310

There are 21 sheets in PDB entry 6HBE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	98	104	first strand
Strand 2	A	62	69	anti-parallel
Strand 3	A	21	36	parallel
Strand 4	A	39	46	anti-parallel
Strand 5	A	309	311	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	55	58	first strand
Strand 2	A	131	137	parallel
Strand 3	A	109	114	anti-parallel
Strand 4	A	78	79	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	177	180	first strand
Strand 2	A	154	163	anti-parallel
Strand 3	A	199	208	parallel
Strand 4	A	248	254	anti-parallel
Strand 5	A	222	227	anti-parallel
Strand 6	A	234	238	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	192	194	first strand
Strand 2	A	277	282	parallel
Strand 3	A	260	266	anti-parallel
Strand 4	A	213	217	anti-parallel
Strand 5	A	241	243	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	324	326	first strand
Strand 2	A	362	366	parallel
Strand 3	A	435	443	parallel
Strand 4	A	422	427	anti-parallel
Strand 5	A	393	398	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	324	326	first strand
Strand 2	A	362	366	parallel
Strand 3	A	435	443	parallel
Strand 4	B	337	338	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	337	338	first strand
Strand 2	C	435	443	anti-parallel
Strand 3	C	362	366	parallel
Strand 4	C	324	326	parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	337	338	first strand
Strand 2	C	435	443	anti-parallel
Strand 3	C	422	427	anti-parallel
Strand 4	C	393	398	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	358	359	first strand
Strand 2	A	349	353	anti-parallel
Strand 3	A	370	375	parallel
Strand 4	A	413	417	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	98	104	first strand
Strand 2	B	62	69	anti-parallel
Strand 3	B	21	36	parallel
Strand 4	B	39	46	anti-parallel
Strand 5	B	309	311	parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	55	58	first strand
Strand 2	B	131	137	parallel
Strand 3	B	109	114	anti-parallel
Strand 4	B	78	79	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	177	180	first strand
Strand 2	B	154	163	anti-parallel
Strand 3	B	199	208	parallel
Strand 4	B	248	254	anti-parallel
Strand 5	B	222	227	anti-parallel
Strand 6	B	234	238	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	192	194	first strand
Strand 2	B	277	282	parallel
Strand 3	B	260	266	anti-parallel
Strand 4	B	213	217	anti-parallel
Strand 5	B	241	243	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	324	326	first strand
Strand 2	B	362	366	parallel
Strand 3	B	435	443	parallel
Strand 4	B	422	427	anti-parallel
Strand 5	B	393	398	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	324	326	first strand
Strand 2	B	362	366	parallel
Strand 3	B	435	443	parallel
Strand 4	C	337	338	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	358	359	first strand
Strand 2	B	349	353	anti-parallel
Strand 3	B	370	375	parallel
Strand 4	B	413	417	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	98	104	first strand
Strand 2	C	62	69	anti-parallel
Strand 3	C	21	36	parallel
Strand 4	C	39	46	anti-parallel
Strand 5	C	309	311	parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	55	58	first strand
Strand 2	C	131	137	parallel
Strand 3	C	109	114	anti-parallel
Strand 4	C	78	79	anti-parallel

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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	177	180	first strand
Strand 2	C	154	163	anti-parallel
Strand 3	C	199	208	parallel
Strand 4	C	248	254	anti-parallel
Strand 5	C	222	227	anti-parallel
Strand 6	C	234	238	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	192	194	first strand
Strand 2	C	277	282	parallel
Strand 3	C	260	266	anti-parallel
Strand 4	C	213	217	anti-parallel
Strand 5	C	241	243	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	358	359	first strand
Strand 2	C	349	353	anti-parallel
Strand 3	C	370	375	parallel
Strand 4	C	413	417	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6HBE

Analysis of interatomic Contacts of Structural Units in PDB entry:
6HBE