Analysis of interatomic Contacts of Structural Units in PDB entry:
6HE2

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6HE2 entry

There are 2 chains in PDB entry 6HE2 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	HIS -4	ASP 462
B	HIS -2	ALA 439

There are 36 helices in PDB entry 6HE2. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	24	30	Right-handed alpha
Helix 2	AA2	A	31	54	Right-handed alpha
Helix 3	AA3	A	54	64	Right-handed alpha
Helix 4	AA4	A	67	71	Right-handed 310
Helix 5	AA5	A	73	81	Right-handed alpha
Helix 6	AA6	A	85	96	Right-handed alpha
Helix 7	AA7	A	106	108	Right-handed 310
Helix 8	AA8	A	130	147	Right-handed alpha
Helix 9	AA9	A	164	177	Right-handed alpha
Helix 10	AB1	A	190	203	Right-handed alpha
Helix 11	AB2	A	210	224	Right-handed alpha
Helix 12	AB3	A	227	231	Right-handed 310
Helix 13	AB4	A	246	258	Right-handed alpha
Helix 14	AB5	A	267	271	Right-handed 310
Helix 15	AB6	A	272	274	Right-handed 310
Helix 16	AB7	A	371	380	Right-handed alpha
Helix 17	AB8	A	409	415	Right-handed alpha
Helix 18	AB9	A	416	436	Right-handed alpha
Helix 19	AC1	B	24	30	Right-handed alpha
Helix 20	AC2	B	31	54	Right-handed alpha
Helix 21	AC3	B	54	64	Right-handed alpha
Helix 22	AC4	B	67	71	Right-handed 310
Helix 23	AC5	B	73	81	Right-handed alpha
Helix 24	AC6	B	85	96	Right-handed alpha
Helix 25	AC7	B	106	108	Right-handed 310
Helix 26	AC8	B	130	147	Right-handed alpha
Helix 27	AC9	B	164	177	Right-handed alpha
Helix 28	AD1	B	190	203	Right-handed alpha
Helix 29	AD2	B	210	224	Right-handed alpha
Helix 30	AD3	B	227	232	Right-handed 310
Helix 31	AD4	B	246	258	Right-handed alpha
Helix 32	AD5	B	267	271	Right-handed 310
Helix 33	AD6	B	272	274	Right-handed 310
Helix 34	AD7	B	371	380	Right-handed alpha
Helix 35	AD8	B	409	415	Right-handed alpha
Helix 36	AD9	B	416	436	Right-handed alpha

There are 14 sheets in PDB entry 6HE2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	110	115	first strand
Strand 2	A	125	129	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	180	182	first strand
Strand 2	A	154	157	parallel
Strand 3	A	206	209	parallel
Strand 4	A	235	238	parallel
Strand 5	A	260	263	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	276	277	first strand
Strand 2	A	286	288	anti-parallel
Strand 3	A	350	351	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	293	298	first strand
Strand 2	A	311	318	anti-parallel
Strand 3	A	329	330	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	293	298	first strand
Strand 2	A	311	318	anti-parallel
Strand 3	A	333	336	anti-parallel
Strand 4	A	355	358	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	363	365	first strand
Strand 2	A	368	370	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	440	443	first strand
Strand 2	A	401	408	parallel
Strand 3	A	385	394	anti-parallel
Strand 4	A	459	460	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	110	115	first strand
Strand 2	B	125	129	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	180	182	first strand
Strand 2	B	154	157	parallel
Strand 3	B	206	209	parallel
Strand 4	B	235	238	parallel
Strand 5	B	260	263	parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	276	277	first strand
Strand 2	B	286	288	anti-parallel
Strand 3	B	350	351	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	293	298	first strand
Strand 2	B	311	318	anti-parallel
Strand 3	B	329	330	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	293	298	first strand
Strand 2	B	311	318	anti-parallel
Strand 3	B	333	336	anti-parallel
Strand 4	B	355	358	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	363	365	first strand
Strand 2	B	368	370	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	385	390	first strand
Strand 2	B	405	408	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6HE2

Analysis of interatomic Contacts of Structural Units in PDB entry:
6HE2