Analysis of interatomic Contacts of Structural Units in PDB entry:
6HE5

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6HE5 entry

There are 20 chains in PDB entry 6HE5 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 5	LYS 246
B	GLN 5	LYS 246
C	GLN 5	LYS 246
D	GLN 5	LYS 246
E	GLN 5	LYS 246
F	GLN 5	LYS 246
G	GLN 5	LYS 246
1	THR 12	LYS 213
2	THR 12	LYS 213
3	THR 12	LYS 213
4	THR 12	LYS 213
5	THR 12	LYS 213
6	THR 12	LYS 213
7	THR 12	LYS 213
H	PRO 390	VAL 398
I	PRO 390	VAL 398
K	PRO 390	VAL 398
L	PRO 390	VAL 398
M	PRO 390	VAL 398
J	PRO 390	VAL 398

There are 83 helices in PDB entry 6HE5. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	21	28	Right-handed alpha
Helix 2	AA2	A	28	34	Right-handed alpha
Helix 3	AA3	A	81	103	Right-handed alpha
Helix 4	AA4	A	108	126	Right-handed alpha
Helix 5	AA5	A	167	179	Right-handed alpha
Helix 6	AA6	A	184	201	Right-handed alpha
Helix 7	AA7	A	205	207	Right-handed 310
Helix 8	AA8	A	225	244	Right-handed alpha
Helix 9	AA9	B	23	32	Right-handed alpha
Helix 10	AB1	B	81	104	Right-handed alpha
Helix 11	AB2	B	108	126	Right-handed alpha
Helix 12	AB3	B	167	178	Right-handed alpha
Helix 13	AB4	B	184	201	Right-handed alpha
Helix 14	AB5	B	225	245	Right-handed alpha
Helix 15	AB6	C	21	29	Right-handed alpha
Helix 16	AB7	C	81	103	Right-handed alpha
Helix 17	AB8	C	108	123	Right-handed alpha
Helix 18	AB9	C	167	179	Right-handed alpha
Helix 19	AC1	C	184	201	Right-handed alpha
Helix 20	AC2	C	225	244	Right-handed alpha
Helix 21	AC3	D	21	33	Right-handed alpha
Helix 22	AC4	D	81	103	Right-handed alpha
Helix 23	AC5	D	108	126	Right-handed alpha
Helix 24	AC6	D	167	179	Right-handed alpha
Helix 25	AC7	D	184	201	Right-handed alpha
Helix 26	AC8	D	205	207	Right-handed 310
Helix 27	AC9	D	225	243	Right-handed alpha
Helix 28	AD1	E	21	34	Right-handed alpha
Helix 29	AD2	E	81	103	Right-handed alpha
Helix 30	AD3	E	108	126	Right-handed alpha
Helix 31	AD4	E	167	179	Right-handed alpha
Helix 32	AD5	E	184	201	Right-handed alpha
Helix 33	AD6	E	225	228	Right-handed 310
Helix 34	AD7	E	229	244	Right-handed alpha
Helix 35	AD8	F	21	34	Right-handed alpha
Helix 36	AD9	F	82	104	Right-handed alpha
Helix 37	AE1	F	108	126	Right-handed alpha
Helix 38	AE2	F	167	178	Right-handed alpha
Helix 39	AE3	F	184	201	Right-handed alpha
Helix 40	AE4	F	225	244	Right-handed alpha
Helix 41	AE5	G	21	34	Right-handed alpha
Helix 42	AE6	G	83	104	Right-handed alpha
Helix 43	AE7	G	108	126	Right-handed alpha
Helix 44	AE8	G	167	179	Right-handed alpha
Helix 45	AE9	G	184	200	Right-handed alpha
Helix 46	AF1	G	229	246	Right-handed alpha
Helix 47	AF2	1	59	82	Right-handed alpha
Helix 48	AF3	1	86	101	Right-handed alpha
Helix 49	AF4	1	143	153	Right-handed alpha
Helix 50	AF5	1	160	179	Right-handed alpha
Helix 51	AF6	1	199	208	Right-handed alpha
Helix 52	AF7	2	59	82	Right-handed alpha
Helix 53	AF8	2	86	101	Right-handed alpha
Helix 54	AF9	2	143	153	Right-handed alpha
Helix 55	AG1	2	163	177	Right-handed alpha
Helix 56	AG2	2	199	206	Right-handed alpha
Helix 57	AG3	3	59	82	Right-handed alpha
Helix 58	AG4	3	86	101	Right-handed alpha
Helix 59	AG5	3	143	154	Right-handed alpha
Helix 60	AG6	3	160	176	Right-handed alpha
Helix 61	AG7	3	177	179	Right-handed 310
Helix 62	AG8	3	200	206	Right-handed alpha
Helix 63	AG9	4	59	82	Right-handed alpha
Helix 64	AH1	4	86	101	Right-handed alpha
Helix 65	AH2	4	143	154	Right-handed alpha
Helix 66	AH3	4	160	177	Right-handed alpha
Helix 67	AH4	4	199	209	Right-handed alpha
Helix 68	AH5	5	59	82	Right-handed alpha
Helix 69	AH6	5	86	101	Right-handed alpha
Helix 70	AH7	5	143	152	Right-handed alpha
Helix 71	AH8	5	160	177	Right-handed alpha
Helix 72	AH9	5	179	184	Right-handed 310
Helix 73	AI1	5	199	206	Right-handed alpha
Helix 74	AI2	6	59	82	Right-handed alpha
Helix 75	AI3	6	86	101	Right-handed alpha
Helix 76	AI4	6	143	155	Right-handed alpha
Helix 77	AI5	6	160	179	Right-handed alpha
Helix 78	AI6	6	199	208	Right-handed alpha
Helix 79	AI7	7	60	82	Right-handed alpha
Helix 80	AI8	7	86	101	Right-handed alpha
Helix 81	AI9	7	143	154	Right-handed alpha
Helix 82	AJ1	7	163	177	Right-handed alpha
Helix 83	AJ2	7	199	205	Right-handed alpha

There are 33 sheets in PDB entry 6HE5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	161	164	first strand
Strand 2	A	37	41	anti-parallel
Strand 3	A	45	51	anti-parallel
Strand 4	A	209	215	anti-parallel
Strand 5	A	221	224	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	67	69	first strand
Strand 2	A	74	80	anti-parallel
Strand 3	A	134	141	anti-parallel
Strand 4	A	145	150	anti-parallel
Strand 5	A	156	159	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	161	164	first strand
Strand 2	B	37	42	anti-parallel
Strand 3	B	45	51	anti-parallel
Strand 4	B	209	215	anti-parallel
Strand 5	B	221	223	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	68	71	first strand
Strand 2	B	74	79	anti-parallel
Strand 3	B	135	141	anti-parallel
Strand 4	B	145	150	anti-parallel
Strand 5	B	156	159	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	161	164	first strand
Strand 2	C	37	42	anti-parallel
Strand 3	C	45	51	anti-parallel
Strand 4	C	209	215	anti-parallel
Strand 5	C	221	223	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	67	69	first strand
Strand 2	C	74	79	anti-parallel
Strand 3	C	135	141	anti-parallel
Strand 4	C	145	150	anti-parallel
Strand 5	C	156	159	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	161	164	first strand
Strand 2	D	37	41	anti-parallel
Strand 3	D	45	51	anti-parallel
Strand 4	D	209	215	anti-parallel
Strand 5	D	221	223	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	68	69	first strand
Strand 2	D	74	80	anti-parallel
Strand 3	D	134	141	anti-parallel
Strand 4	D	145	150	anti-parallel
Strand 5	D	156	159	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	161	164	first strand
Strand 2	E	37	42	anti-parallel
Strand 3	E	45	51	anti-parallel
Strand 4	E	209	215	anti-parallel
Strand 5	E	220	224	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	67	69	first strand
Strand 2	E	74	80	anti-parallel
Strand 3	E	134	141	anti-parallel
Strand 4	E	145	150	anti-parallel
Strand 5	E	156	158	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	161	164	first strand
Strand 2	F	37	42	anti-parallel
Strand 3	F	45	51	anti-parallel
Strand 4	F	209	215	anti-parallel
Strand 5	F	221	224	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	68	69	first strand
Strand 2	F	74	81	anti-parallel
Strand 3	F	135	141	anti-parallel
Strand 4	F	145	150	anti-parallel
Strand 5	F	156	159	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	68	69	first strand
Strand 2	F	74	81	anti-parallel
Strand 3	M	397	398	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	161	164	first strand
Strand 2	G	37	42	anti-parallel
Strand 3	G	45	51	anti-parallel
Strand 4	G	209	215	anti-parallel
Strand 5	G	221	223	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	68	69	first strand
Strand 2	G	74	81	anti-parallel
Strand 3	G	134	141	anti-parallel
Strand 4	G	145	150	anti-parallel
Strand 5	G	156	158	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	68	69	first strand
Strand 2	G	74	81	anti-parallel
Strand 3	L	397	398	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	1	139	141	first strand
Strand 2	1	13	18	anti-parallel
Strand 3	1	23	27	anti-parallel
Strand 4	1	187	191	anti-parallel
Strand 5	1	196	198	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	1	32	33	first strand
Strand 2	1	36	37	anti-parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	1	45	49	first strand
Strand 2	1	52	58	anti-parallel
Strand 3	1	108	115	anti-parallel
Strand 4	1	120	125	anti-parallel
Strand 5	1	131	134	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	137	138	first strand
Strand 2	2	14	18	anti-parallel
Strand 3	2	23	27	anti-parallel
Strand 4	2	187	191	anti-parallel
Strand 5	2	196	198	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	32	33	first strand
Strand 2	2	36	37	anti-parallel

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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	45	49	first strand
Strand 2	2	52	58	anti-parallel
Strand 3	2	108	116	anti-parallel
Strand 4	2	119	125	anti-parallel
Strand 5	2	131	134	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	14	18	first strand
Strand 2	3	23	28	anti-parallel
Strand 3	3	186	191	anti-parallel
Strand 4	3	196	198	anti-parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	46	49	first strand
Strand 2	3	52	57	anti-parallel
Strand 3	3	109	116	anti-parallel
Strand 4	3	119	125	anti-parallel
Strand 5	3	131	134	anti-parallel

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There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	137	138	first strand
Strand 2	4	15	18	anti-parallel
Strand 3	4	23	28	anti-parallel
Strand 4	4	186	191	anti-parallel
Strand 5	4	196	198	anti-parallel

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There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	46	49	first strand
Strand 2	4	52	58	anti-parallel
Strand 3	4	108	116	anti-parallel
Strand 4	4	119	125	anti-parallel
Strand 5	4	131	132	anti-parallel

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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	5	137	140	first strand
Strand 2	5	14	18	anti-parallel
Strand 3	5	23	28	anti-parallel
Strand 4	5	186	191	anti-parallel
Strand 5	5	196	198	anti-parallel

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There are 5 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	5	45	49	first strand
Strand 2	5	52	58	anti-parallel
Strand 3	5	108	116	anti-parallel
Strand 4	5	119	125	anti-parallel
Strand 5	5	131	134	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	6	14	18	first strand
Strand 2	6	23	28	anti-parallel
Strand 3	6	186	191	anti-parallel
Strand 4	6	196	198	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	6	31	33	first strand
Strand 2	6	36	39	anti-parallel

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There are 5 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	6	45	49	first strand
Strand 2	6	52	57	anti-parallel
Strand 3	6	109	116	anti-parallel
Strand 4	6	119	125	anti-parallel
Strand 5	6	131	134	anti-parallel

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There are 5 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	7	137	141	first strand
Strand 2	7	13	19	anti-parallel
Strand 3	7	22	28	anti-parallel
Strand 4	7	186	191	anti-parallel
Strand 5	7	196	198	anti-parallel

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There are 5 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	7	45	47	first strand
Strand 2	7	52	58	anti-parallel
Strand 3	7	108	116	anti-parallel
Strand 4	7	119	126	anti-parallel
Strand 5	7	129	134	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6HE5

Analysis of interatomic Contacts of Structural Units in PDB entry:
6HE5