Analysis of interatomic Contacts of Structural Units in PDB entry:
6HEB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6HEB entry

There is 1 chain in PDB entry 6HEB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ARG 83LEU 470
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 3 helices in PDB entry 6HEB. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
105 111Right-handed alpha
Helix 2
AA2
A
143 147Right-handed 310
Helix 3
AA3
A
465 470Right-handed 310
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There are 6 sheets in PDB entry 6HEB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
97 103first strand
Strand 2
A
441 451anti-parallel
Strand 3
A
422 431anti-parallel
Strand 4
A
407 411anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
116 126first strand
Strand 2
A
129 140anti-parallel
Strand 3
A
158 163anti-parallel
Strand 4
A
174 178anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
181 186first strand
Strand 2
A
191 197anti-parallel
Strand 3
A
204 209anti-parallel
Strand 4
A
212 218anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
239 246first strand
Strand 2
A
252 260anti-parallel
Strand 3
A
263 269anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
278 285first strand
Strand 2
A
288 294anti-parallel
Strand 3
A
303 308anti-parallel
Strand 4
A
313 318anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
354 355first strand
Strand 2
A
362 365anti-parallel
Strand 3
A
373 379anti-parallel
Strand 4
A
393 403anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il