Analysis of interatomic Contacts of Structural Units in PDB entry:
6HEK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6HEK entry

There are 4 chains in PDB entry 6HEK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 149SER 700
B
 GLY -1GLY 75
C
 PRO 149GLU 698
D
 GLN 2GLY 75
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 40 helices in PDB entry 6HEK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
151 155Right-handed 310
Helix 2
AA2
A
170 183Right-handed alpha
Helix 3
AA3
A
183 192Right-handed alpha
Helix 4
AA4
A
196 203Right-handed alpha
Helix 5
AA5
A
205 228Right-handed alpha
Helix 6
AA6
A
235 242Right-handed alpha
Helix 7
AA7
A
255 278Right-handed alpha
Helix 8
AA8
A
286 293Right-handed alpha
Helix 9
AA9
A
325 334Right-handed alpha
Helix 10
AB1
A
395 400Right-handed 310
Helix 11
AB2
A
401 431Right-handed alpha
Helix 12
AB3
A
440 453Right-handed alpha
Helix 13
AB4
A
534 572Right-handed alpha
Helix 14
AB5
A
576 580Right-handed 310
Helix 15
AB6
A
625 635Right-handed alpha
Helix 16
AB7
A
668 673Right-handed alpha
Helix 17
AB8
A
674 700Right-handed alpha
Helix 18
AB9
B
22 35Right-handed alpha
Helix 19
AC1
B
37 41Right-handed 310
Helix 20
AC2
B
56 60Right-handed 310
Helix 21
AC3
C
150 155Right-handed 310
Helix 22
AC4
C
170 182Right-handed alpha
Helix 23
AC5
C
183 192Right-handed alpha
Helix 24
AC6
C
196 203Right-handed alpha
Helix 25
AC7
C
205 228Right-handed alpha
Helix 26
AC8
C
235 247Right-handed alpha
Helix 27
AC9
C
255 276Right-handed alpha
Helix 28
AD1
C
286 293Right-handed alpha
Helix 29
AD2
C
325 335Right-handed alpha
Helix 30
AD3
C
395 398Right-handed 310
Helix 31
AD4
C
401 431Right-handed alpha
Helix 32
AD5
C
440 453Right-handed alpha
Helix 33
AD6
C
534 571Right-handed alpha
Helix 34
AD7
C
576 580Right-handed 310
Helix 35
AD8
C
625 635Right-handed alpha
Helix 36
AD9
C
667 673Right-handed 310
Helix 37
AE1
C
674 697Right-handed alpha
Helix 38
AE2
D
22 35Right-handed alpha
Helix 39
AE3
D
37 41Right-handed 310
Helix 40
AE4
D
56 60Right-handed 310
Back to top of page

There are 12 sheets in PDB entry 6HEK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
163 164first strand
Strand 2
A
232 233parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
305 313first strand
Strand 2
A
294 302anti-parallel
Strand 3
A
351 358anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
315 319first strand
Strand 2
A
362 368parallel
Strand 3
A
640 649anti-parallel
Strand 4
A
583 595anti-parallel
Strand 5
A
391 393anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
315 319first strand
Strand 2
A
362 368parallel
Strand 3
A
640 649anti-parallel
Strand 4
A
583 595anti-parallel
Strand 5
A
598 607anti-parallel
Strand 6
A
612 617anti-parallel
Strand 7
A
620 623anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
370 373first strand
Strand 2
A
378 381anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
12 17first strand
Strand 2
B
1 6anti-parallel
Strand 3
B
66 70parallel
Strand 4
B
42 45anti-parallel
Strand 5
B
48 49anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
163 164first strand
Strand 2
C
232 233parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
305 313first strand
Strand 2
C
294 302anti-parallel
Strand 3
C
351 358anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
315 319first strand
Strand 2
C
362 368parallel
Strand 3
C
640 649anti-parallel
Strand 4
C
583 594anti-parallel
Strand 5
C
391 393anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
315 319first strand
Strand 2
C
362 368parallel
Strand 3
C
640 649anti-parallel
Strand 4
C
583 594anti-parallel
Strand 5
C
599 607anti-parallel
Strand 6
C
612 617anti-parallel
Strand 7
C
620 623anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
370 373first strand
Strand 2
C
378 381anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
12 15first strand
Strand 2
D
3 6anti-parallel
Strand 3
D
66 70parallel
Strand 4
D
42 45anti-parallel
Strand 5
D
48 49anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il