Analysis of interatomic Contacts of Structural Units in PDB entry:
6HF4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6HF4 entry

There is 1 chain in PDB entry 6HF4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 37LEU 361
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 6HF4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
51 65Right-handed alpha
Helix 2
AA2
A
81 92Right-handed alpha
Helix 3
AA3
A
118 127Right-handed alpha
Helix 4
AA4
A
158 163Right-handed alpha
Helix 5
AA5
A
167 190Right-handed alpha
Helix 6
AA6
A
201 205Right-handed 310
Helix 7
AA7
A
207 211Right-handed 310
Helix 8
AA8
A
212 230Right-handed alpha
Helix 9
AA9
A
245 249Right-handed 310
Helix 10
AB1
A
251 255Right-handed 310
Helix 11
AB2
A
267 282Right-handed alpha
Helix 12
AB3
A
297 304Right-handed alpha
Helix 13
AB4
A
316 321Right-handed alpha
Helix 14
AB5
A
325 330Right-handed 310
Helix 15
AB6
A
337 346Right-handed alpha
Helix 16
AB7
A
352 356Right-handed 310
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There are 2 sheets in PDB entry 6HF4. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
350 351first strand
Strand 2
A
69 74parallel
Strand 3
A
310 313parallel
Strand 4
A
287 295parallel
Strand 5
A
257 265parallel
Strand 6
A
235 241parallel
Strand 7
A
194 198parallel
Strand 8
A
130 135parallel
Strand 9
A
97 101parallel
Strand 10
A
69 74parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
139 140first strand
Strand 2
A
148 149anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il