Analysis of interatomic Contacts of Structural Units in PDB entry:
6HFI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6HFI entry

There are 2 chains in PDB entry 6HFI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 1460LEU 1555
A
 LEU 1557PRO 1821
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 6HFI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1484 1495Right-handed alpha
Helix 2
AA2
A
1512 1527Right-handed alpha
Helix 3
AA3
A
1548 1552Right-handed 310
Helix 4
AA4
A
1570 1581Right-handed alpha
Helix 5
AA5
A
1593 1606Right-handed alpha
Helix 6
AA6
A
1617 1630Right-handed alpha
Helix 7
AA7
A
1639 1645Right-handed alpha
Helix 8
AA8
A
1646 1648Right-handed 310
Helix 9
AA9
A
1649 1658Right-handed alpha
Helix 10
AB1
A
1666 1676Right-handed alpha
Helix 11
AB2
A
1677 1680Right-handed 310
Helix 12
AB3
A
1691 1696Right-handed alpha
Helix 13
AB4
A
1706 1720Right-handed alpha
Helix 14
AB5
A
1724 1733Right-handed alpha
Helix 15
AB6
A
1733 1741Right-handed alpha
Helix 16
AB7
A
1808 1816Right-handed 310
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There are 3 sheets in PDB entry 6HFI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1462 1465first strand
Strand 2
A
1749 1759anti-parallel
Strand 3
A
1778 1788anti-parallel
Strand 4
A
1791 1795anti-parallel
Strand 5
A
1798 1799anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1467 1472first strand
Strand 2
A
1497 1502parallel
Strand 3
A
1530 1533parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1535 1536first strand
Strand 2
A
1555 1558parallel
Strand 3
A
1587 1590parallel
Strand 4
A
1610 1612parallel
Strand 5
A
1634 1638parallel
Strand 6
A
1682 1683parallel
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