Analysis of interatomic Contacts of Structural Units in PDB entry:
6HGC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6HGC entry

There are 3 chains in PDB entry 6HGC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 43SER 404
C
 LYS 209LYS 318
B
 GLY 45THR 373
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 6HGC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
52 63Right-handed alpha
Helix 2
AA2
A
115 120Right-handed alpha
Helix 3
AA3
A
130 141Right-handed alpha
Helix 4
AA4
A
151 161Right-handed alpha
Helix 5
AA5
A
165 175Right-handed alpha
Helix 6
AA6
A
176 185Right-handed alpha
Helix 7
AA7
A
188 195Right-handed alpha
Helix 8
AA8
A
246 258Right-handed alpha
Helix 9
AA9
A
277 307Right-handed alpha
Helix 10
AB1
A
334 373Right-handed alpha
Helix 11
AB2
A
376 390Right-handed alpha
Helix 12
AB3
A
392 400Right-handed alpha
Helix 13
AB4
C
217 222Right-handed 310
Helix 14
AB5
C
223 228Right-handed alpha
Helix 15
AB6
C
229 235Right-handed alpha
Helix 16
AB7
C
237 246Right-handed alpha
Helix 17
AB8
C
249 257Right-handed alpha
Helix 18
AB9
C
284 300Right-handed alpha
Helix 19
AC1
C
303 318Right-handed alpha
Helix 20
AC2
B
52 63Right-handed alpha
Helix 21
AC3
B
113 118Right-handed alpha
Helix 22
AC4
B
130 141Right-handed alpha
Helix 23
AC5
B
150 161Right-handed alpha
Helix 24
AC6
B
165 175Right-handed alpha
Helix 25
AC7
B
176 186Right-handed alpha
Helix 26
AC8
B
246 258Right-handed alpha
Helix 27
AC9
B
277 306Right-handed alpha
Helix 28
AD1
B
333 373Right-handed alpha
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There are 2 sheets in PDB entry 6HGC. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 72first strand
Strand 2
A
269 275anti-parallel
Strand 3
A
85 90anti-parallel
Strand 4
A
213 219anti-parallel
Strand 5
A
224 227anti-parallel
Strand 6
A
235 236anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
68 72first strand
Strand 2
B
270 276anti-parallel
Strand 3
B
85 90anti-parallel
Strand 4
B
213 220anti-parallel
Strand 5
B
223 228anti-parallel
Strand 6
B
235 236anti-parallel
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