Analysis of interatomic Contacts of Structural Units in PDB entry:
6HHU

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6HHU entry

There are 3 chains in PDB entry 6HHU (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 216	PRO 811
G	GLN 1	SER 119
H	GLN 1	SER 123

There are 8 helices in PDB entry 6HHU. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	237	239	Right-handed 310
Helix 2	AA2	A	341	345	Right-handed 310
Helix 3	AA3	A	705	710	Right-handed alpha
Helix 4	AA4	A	728	733	Right-handed alpha
Helix 5	AA5	A	744	748	Right-handed alpha
Helix 6	AA6	G	86	90	Right-handed 310
Helix 7	AA7	H	28	32	Right-handed 310
Helix 8	AA8	H	86	90	Right-handed 310

There are 23 sheets in PDB entry 6HHU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	217	221	first strand
Strand 2	A	224	228	anti-parallel
Strand 3	A	265	270	anti-parallel
Strand 4	A	254	259	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	251	252	first strand
Strand 2	A	241	245	anti-parallel
Strand 3	A	278	284	anti-parallel
Strand 4	A	288	294	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	301	304	first strand
Strand 2	A	319	322	anti-parallel
Strand 3	A	328	329	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	307	310	first strand
Strand 2	A	378	383	parallel
Strand 3	A	358	367	anti-parallel
Strand 4	A	335	338	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	307	310	first strand
Strand 2	A	378	383	parallel
Strand 3	A	358	367	anti-parallel
Strand 4	A	370	374	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	315	316	first strand
Strand 2	A	350	351	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	387	396	first strand
Strand 2	A	421	428	anti-parallel
Strand 3	A	433	434	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	413	415	first strand
Strand 2	A	481	489	parallel
Strand 3	A	463	472	anti-parallel
Strand 4	A	437	442	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	448	450	first strand
Strand 2	A	457	459	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	494	497	first strand
Strand 2	A	520	522	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	503	507	first strand
Strand 2	A	581	592	parallel
Strand 3	A	568	578	anti-parallel
Strand 4	A	532	537	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	514	517	first strand
Strand 2	A	557	561	anti-parallel
Strand 3	A	550	554	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	599	603	first strand
Strand 2	A	625	629	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	608	610	first strand
Strand 2	A	695	702	parallel
Strand 3	A	682	688	anti-parallel
Strand 4	A	643	646	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	621	623	first strand
Strand 2	A	670	673	anti-parallel
Strand 3	A	663	666	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	713	715	first strand
Strand 2	A	737	739	anti-parallel
Strand 3	A	742	743	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	719	723	first strand
Strand 2	A	790	806	parallel
Strand 3	A	775	787	anti-parallel
Strand 4	A	750	758	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	3	7	first strand
Strand 2	G	18	25	anti-parallel
Strand 3	G	77	82	anti-parallel
Strand 4	G	67	72	anti-parallel

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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	10	13	first strand
Strand 2	G	113	118	parallel
Strand 3	G	91	98	anti-parallel
Strand 4	G	33	39	anti-parallel
Strand 5	G	46	52	anti-parallel
Strand 6	G	57	59	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	10	13	first strand
Strand 2	G	113	118	parallel
Strand 3	G	91	98	anti-parallel
Strand 4	G	107	109	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	3	7	first strand
Strand 2	H	18	25	anti-parallel
Strand 3	H	77	82	anti-parallel
Strand 4	H	67	72	anti-parallel

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There are 6 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	10	12	first strand
Strand 2	H	118	122	parallel
Strand 3	H	91	99	anti-parallel
Strand 4	H	34	39	anti-parallel
Strand 5	H	45	51	anti-parallel
Strand 6	H	57	59	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	10	12	first strand
Strand 2	H	118	122	parallel
Strand 3	H	91	99	anti-parallel
Strand 4	H	111	114	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6HHU

Analysis of interatomic Contacts of Structural Units in PDB entry:
6HHU