Analysis of interatomic Contacts of Structural Units in PDB entry:
6HJL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6HJL entry

There are 8 chains in PDB entry 6HJL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2ASN 197
B
 SER 2TYR 195
C
 GLU 2VAL 91
D
 GLU 2VAL 91
E
 GLN 3TYR 195
F
 GLN 3TYR 195
H
 GLU 2VAL 91
G
 SER 4VAL 91
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 6HJL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 20Right-handed alpha
Helix 2
AA2
A
25 101Right-handed alpha
Helix 3
AA3
A
101 110Right-handed alpha
Helix 4
AA4
A
119 131Right-handed alpha
Helix 5
AA5
A
136 157Right-handed alpha
Helix 6
AA6
A
158 161Right-handed 310
Helix 7
AA7
A
162 178Right-handed alpha
Helix 8
AA8
A
178 185Right-handed alpha
Helix 9
AA9
A
187 197Right-handed alpha
Helix 10
AB1
B
3 20Right-handed alpha
Helix 11
AB2
B
25 101Right-handed alpha
Helix 12
AB3
B
101 110Right-handed alpha
Helix 13
AB4
B
119 131Right-handed alpha
Helix 14
AB5
B
136 157Right-handed alpha
Helix 15
AB6
B
161 178Right-handed alpha
Helix 16
AB7
B
178 185Right-handed alpha
Helix 17
AB8
B
187 195Right-handed alpha
Helix 18
AB9
C
3 23Right-handed alpha
Helix 19
AC1
D
3 22Right-handed alpha
Helix 20
AC2
E
4 20Right-handed alpha
Helix 21
AC3
E
25 101Right-handed alpha
Helix 22
AC4
E
101 110Right-handed alpha
Helix 23
AC5
E
119 131Right-handed alpha
Helix 24
AC6
E
136 157Right-handed alpha
Helix 25
AC7
E
161 178Right-handed alpha
Helix 26
AC8
E
178 185Right-handed alpha
Helix 27
AC9
E
186 195Right-handed alpha
Helix 28
AD1
F
4 20Right-handed alpha
Helix 29
AD2
F
25 101Right-handed alpha
Helix 30
AD3
F
101 110Right-handed alpha
Helix 31
AD4
F
119 131Right-handed alpha
Helix 32
AD5
F
136 157Right-handed alpha
Helix 33
AD6
F
159 161Right-handed 310
Helix 34
AD7
F
162 177Right-handed alpha
Helix 35
AD8
F
178 185Right-handed alpha
Helix 36
AD9
F
186 195Right-handed alpha
Helix 37
AE1
H
3 22Right-handed alpha
Helix 38
AE2
G
5 22Right-handed alpha
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There are 4 sheets in PDB entry 6HJL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
27 41first strand
Strand 2
C
44 57anti-parallel
Strand 3
C
60 72anti-parallel
Strand 4
C
81 90anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
27 41first strand
Strand 2
D
44 57anti-parallel
Strand 3
D
60 71anti-parallel
Strand 4
D
82 90anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
27 41first strand
Strand 2
H
44 57anti-parallel
Strand 3
H
60 71anti-parallel
Strand 4
H
82 90anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
27 41first strand
Strand 2
G
44 57anti-parallel
Strand 3
G
60 72anti-parallel
Strand 4
G
81 90anti-parallel
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