Analysis of interatomic Contacts of Structural Units in PDB entry:
6HJO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6HJO entry

There are 2 chains in PDB entry 6HJO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2LYS 192
B
 SER 2LYS 192
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 6HJO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
24 36Right-handed alpha
Helix 2
AA2
A
37 41Right-handed 310
Helix 3
AA3
A
85 93Right-handed alpha
Helix 4
AA4
A
106 108Right-handed 310
Helix 5
AA5
A
109 127Right-handed alpha
Helix 6
AA6
A
150 159Right-handed alpha
Helix 7
AA7
A
169 173Right-handed 310
Helix 8
AA8
A
175 192Right-handed alpha
Helix 9
AA9
B
24 36Right-handed alpha
Helix 10
AB1
B
37 41Right-handed 310
Helix 11
AB2
B
85 93Right-handed alpha
Helix 12
AB3
B
106 108Right-handed 310
Helix 13
AB4
B
109 127Right-handed alpha
Helix 14
AB5
B
150 159Right-handed alpha
Helix 15
AB6
B
169 173Right-handed 310
Helix 16
AB7
B
175 192Right-handed alpha
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There are 2 sheets in PDB entry 6HJO. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 5first strand
Strand 2
A
10 18anti-parallel
Strand 3
A
71 78parallel
Strand 4
A
53 59anti-parallel
Strand 5
A
45 48anti-parallel
Strand 6
B
45 48anti-parallel
Strand 7
B
53 59anti-parallel
Strand 8
B
71 78anti-parallel
Strand 9
B
10 18parallel
Strand 10
B
3 5anti-parallel
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There are 14 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
165 167first strand
Strand 2
A
136 141parallel
Strand 3
A
98 104parallel
Strand 4
A
10 18parallel
Strand 5
A
71 78parallel
Strand 6
A
53 59anti-parallel
Strand 7
A
45 48anti-parallel
Strand 8
B
45 48anti-parallel
Strand 9
B
53 59anti-parallel
Strand 10
B
71 78anti-parallel
Strand 11
B
10 18parallel
Strand 12
B
98 104parallel
Strand 13
B
136 141parallel
Strand 14
B
165 167parallel
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